Protein–RNA interactions for Protein: P27512

Cd40, Tumor necrosis factor receptor superfamily member 5, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40P27512 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cd40P27512 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Cd40P27512 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cd40P27512 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cd40P27512 Gm43060-201ENSMUST00000200621 289 ntBASIC17.55■□□□□ 0.4
Cd40P27512 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cd40P27512 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cd40P27512 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Cd40P27512 Notumos-201ENSMUST00000151998 2659 ntBASIC17.55■□□□□ 0.4
Cd40P27512 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cd40P27512 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cd40P27512 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cd40P27512 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cd40P27512 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cd40P27512 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cd40P27512 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Cd40P27512 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Cd40P27512 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Cd40P27512 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC17.54■□□□□ 0.4
Cd40P27512 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC17.54■□□□□ 0.4
Cd40P27512 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cd40P27512 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cd40P27512 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cd40P27512 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Cd40P27512 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cd40P27512 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC17.53■□□□□ 0.4
Cd40P27512 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cd40P27512 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cd40P27512 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cd40P27512 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cd40P27512 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cd40P27512 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cd40P27512 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC17.53■□□□□ 0.4
Cd40P27512 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC17.53■□□□□ 0.4
Cd40P27512 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cd40P27512 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cd40P27512 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cd40P27512 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cd40P27512 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cd40P27512 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC17.53■□□□□ 0.4
Cd40P27512 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Cd40P27512 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Cd40P27512 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cd40P27512 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Cd40P27512 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cd40P27512 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cd40P27512 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Cd40P27512 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Cd40P27512 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cd40P27512 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Cd40P27512 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cd40P27512 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cd40P27512 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Cd40P27512 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
Cd40P27512 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Cd40P27512 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Cd40P27512 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
Cd40P27512 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cd40P27512 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Cd40P27512 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cd40P27512 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Cd40P27512 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cd40P27512 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cd40P27512 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cd40P27512 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cd40P27512 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cd40P27512 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Cd40P27512 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cd40P27512 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cd40P27512 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cd40P27512 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cd40P27512 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cd40P27512 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
Cd40P27512 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cd40P27512 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC17.5■□□□□ 0.39
Cd40P27512 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC17.5■□□□□ 0.39
Cd40P27512 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC17.5■□□□□ 0.39
Cd40P27512 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
Cd40P27512 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cd40P27512 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Cd40P27512 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cd40P27512 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Cd40P27512 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Cd40P27512 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cd40P27512 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cd40P27512 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cd40P27512 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cd40P27512 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cd40P27512 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC17.49■□□□□ 0.39
Cd40P27512 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cd40P27512 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cd40P27512 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cd40P27512 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Cd40P27512 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Cd40P27512 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Cd40P27512 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Cd40P27512 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cd40P27512 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Cd40P27512 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Cd40P27512 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms