Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC19.93■□□□□ 0.78
Nfkb1P25799 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Nfkb1P25799 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Nfkb1P25799 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Nfkb1P25799 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Nfkb1P25799 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Nfkb1P25799 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC19.92■□□□□ 0.78
Nfkb1P25799 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Nfkb1P25799 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Nfkb1P25799 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Nfkb1P25799 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC19.92■□□□□ 0.78
Nfkb1P25799 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC19.92■□□□□ 0.78
Nfkb1P25799 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC19.92■□□□□ 0.78
Nfkb1P25799 CT030146.1-201ENSMUST00000220919 217 ntBASIC19.92■□□□□ 0.78
Nfkb1P25799 AC154266.1-201ENSMUST00000223190 503 ntBASIC19.92■□□□□ 0.78
Nfkb1P25799 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC19.92■□□□□ 0.78
Nfkb1P25799 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
Nfkb1P25799 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Nfkb1P25799 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Nfkb1P25799 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Nfkb1P25799 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC19.91■□□□□ 0.78
Nfkb1P25799 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Nfkb1P25799 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Nfkb1P25799 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Nfkb1P25799 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Nfkb1P25799 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Nfkb1P25799 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC19.9■□□□□ 0.78
Nfkb1P25799 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Nfkb1P25799 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Nfkb1P25799 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Nfkb1P25799 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Nfkb1P25799 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Nfkb1P25799 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC19.9■□□□□ 0.78
Nfkb1P25799 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Nfkb1P25799 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Nfkb1P25799 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Nfkb1P25799 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC19.9■□□□□ 0.78
Nfkb1P25799 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Nfkb1P25799 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Nfkb1P25799 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Nfkb1P25799 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC19.9■□□□□ 0.78
Nfkb1P25799 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Nfkb1P25799 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC19.89■□□□□ 0.77
Nfkb1P25799 Ap3s1-204ENSMUST00000225520 957 ntBASIC19.89■□□□□ 0.77
Nfkb1P25799 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Nfkb1P25799 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Nfkb1P25799 Gm43909-201ENSMUST00000203443 1876 ntBASIC19.88■□□□□ 0.77
Nfkb1P25799 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC19.88■□□□□ 0.77
Nfkb1P25799 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Nfkb1P25799 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Nfkb1P25799 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Nfkb1P25799 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Nfkb1P25799 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Nfkb1P25799 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Nfkb1P25799 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Nfkb1P25799 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Nfkb1P25799 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC19.87■□□□□ 0.77
Nfkb1P25799 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC19.87■□□□□ 0.77
Nfkb1P25799 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Nfkb1P25799 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Nfkb1P25799 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Nfkb1P25799 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Nfkb1P25799 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Nfkb1P25799 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC19.87■□□□□ 0.77
Nfkb1P25799 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Nfkb1P25799 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Nfkb1P25799 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC19.86■□□□□ 0.77
Nfkb1P25799 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Nfkb1P25799 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Nfkb1P25799 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Nfkb1P25799 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC19.86■□□□□ 0.77
Nfkb1P25799 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC19.86■□□□□ 0.77
Nfkb1P25799 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Nfkb1P25799 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Nfkb1P25799 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Nfkb1P25799 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Nfkb1P25799 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Nfkb1P25799 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Nfkb1P25799 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC19.86■□□□□ 0.77
Nfkb1P25799 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Nfkb1P25799 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Nfkb1P25799 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Nfkb1P25799 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Nfkb1P25799 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC19.85■□□□□ 0.77
Nfkb1P25799 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Nfkb1P25799 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Nfkb1P25799 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC19.85■□□□□ 0.77
Nfkb1P25799 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Nfkb1P25799 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Nfkb1P25799 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Nfkb1P25799 Gm7514-201ENSMUST00000209475 934 ntBASIC19.85■□□□□ 0.77
Nfkb1P25799 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Nfkb1P25799 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Nfkb1P25799 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Nfkb1P25799 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Nfkb1P25799 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nfkb1P25799 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nfkb1P25799 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nfkb1P25799 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nfkb1P25799 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms