Protein–RNA interactions for Protein: P24549

Aldh1a1, Retinal dehydrogenase 1, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Aldh1a1P24549 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Aldh1a1P24549 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Aldh1a1P24549 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Aldh1a1P24549 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Aldh1a1P24549 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Aldh1a1P24549 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
Aldh1a1P24549 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Aldh1a1P24549 Gm29241-201ENSMUST00000189260 1096 ntBASIC20.88■□□□□ 0.93
Aldh1a1P24549 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Aldh1a1P24549 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC20.88■□□□□ 0.93
Aldh1a1P24549 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Aldh1a1P24549 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Aldh1a1P24549 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Aldh1a1P24549 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Aldh1a1P24549 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Aldh1a1P24549 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Aldh1a1P24549 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Aldh1a1P24549 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Aldh1a1P24549 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Aldh1a1P24549 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Aldh1a1P24549 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC20.87■□□□□ 0.93
Aldh1a1P24549 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Aldh1a1P24549 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Aldh1a1P24549 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Aldh1a1P24549 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Aldh1a1P24549 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Aldh1a1P24549 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Aldh1a1P24549 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Aldh1a1P24549 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Aldh1a1P24549 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Aldh1a1P24549 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Aldh1a1P24549 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Aldh1a1P24549 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Aldh1a1P24549 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Aldh1a1P24549 AA386476-201ENSMUST00000098781 1665 ntBASIC20.86■□□□□ 0.93
Aldh1a1P24549 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Aldh1a1P24549 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Aldh1a1P24549 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Aldh1a1P24549 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Aldh1a1P24549 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Aldh1a1P24549 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC20.85■□□□□ 0.93
Aldh1a1P24549 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Aldh1a1P24549 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Aldh1a1P24549 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC20.85■□□□□ 0.93
Aldh1a1P24549 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC20.85■□□□□ 0.93
Aldh1a1P24549 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC20.85■□□□□ 0.93
Aldh1a1P24549 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Aldh1a1P24549 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Aldh1a1P24549 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Aldh1a1P24549 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Aldh1a1P24549 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Aldh1a1P24549 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Aldh1a1P24549 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC20.84■□□□□ 0.93
Aldh1a1P24549 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Aldh1a1P24549 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC20.84■□□□□ 0.93
Aldh1a1P24549 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Aldh1a1P24549 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Aldh1a1P24549 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Aldh1a1P24549 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Aldh1a1P24549 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Aldh1a1P24549 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
Aldh1a1P24549 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Aldh1a1P24549 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Aldh1a1P24549 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
Aldh1a1P24549 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
Aldh1a1P24549 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC20.83■□□□□ 0.93
Aldh1a1P24549 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
Aldh1a1P24549 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Aldh1a1P24549 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Aldh1a1P24549 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Aldh1a1P24549 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Aldh1a1P24549 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Aldh1a1P24549 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Aldh1a1P24549 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC20.82■□□□□ 0.92
Aldh1a1P24549 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Aldh1a1P24549 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Aldh1a1P24549 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Aldh1a1P24549 Gm37563-201ENSMUST00000192580 1513 ntBASIC20.82■□□□□ 0.92
Aldh1a1P24549 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC20.82■□□□□ 0.92
Aldh1a1P24549 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Aldh1a1P24549 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Aldh1a1P24549 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Aldh1a1P24549 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Aldh1a1P24549 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Aldh1a1P24549 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC20.81■□□□□ 0.92
Aldh1a1P24549 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Aldh1a1P24549 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Aldh1a1P24549 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Aldh1a1P24549 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Aldh1a1P24549 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Aldh1a1P24549 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Aldh1a1P24549 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC20.81■□□□□ 0.92
Aldh1a1P24549 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Aldh1a1P24549 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Aldh1a1P24549 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC20.8■□□□□ 0.92
Aldh1a1P24549 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Aldh1a1P24549 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Aldh1a1P24549 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Aldh1a1P24549 Gm6576-201ENSMUST00000169678 883 ntBASIC20.8■□□□□ 0.92
Aldh1a1P24549 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC20.8■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms