Protein–RNA interactions for Protein: P20152

Vim, Vimentin, mousemouse

Known RBP Predictions only

Length 466 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VimP20152 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
VimP20152 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
VimP20152 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC19.71■□□□□ 0.75
VimP20152 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
VimP20152 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
VimP20152 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
VimP20152 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC19.7■□□□□ 0.74
VimP20152 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
VimP20152 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
VimP20152 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
VimP20152 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
VimP20152 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
VimP20152 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC19.7■□□□□ 0.74
VimP20152 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
VimP20152 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
VimP20152 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
VimP20152 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
VimP20152 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
VimP20152 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC19.69■□□□□ 0.74
VimP20152 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
VimP20152 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
VimP20152 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
VimP20152 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
VimP20152 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
VimP20152 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
VimP20152 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
VimP20152 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
VimP20152 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
VimP20152 Gm45606-201ENSMUST00000209836 2795 ntBASIC19.68■□□□□ 0.74
VimP20152 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
VimP20152 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
VimP20152 Gm11687-201ENSMUST00000118911 886 ntBASIC19.68■□□□□ 0.74
VimP20152 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC19.68■□□□□ 0.74
VimP20152 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
VimP20152 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
VimP20152 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
VimP20152 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
VimP20152 Cdkn3-203ENSMUST00000227149 1952 ntBASIC19.68■□□□□ 0.74
VimP20152 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
VimP20152 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
VimP20152 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
VimP20152 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
VimP20152 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
VimP20152 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
VimP20152 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
VimP20152 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC19.67■□□□□ 0.74
VimP20152 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
VimP20152 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
VimP20152 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
VimP20152 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC19.67■□□□□ 0.74
VimP20152 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
VimP20152 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
VimP20152 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
VimP20152 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
VimP20152 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
VimP20152 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC19.66■□□□□ 0.74
VimP20152 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
VimP20152 Gm42900-201ENSMUST00000197184 2167 ntBASIC19.66■□□□□ 0.74
VimP20152 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
VimP20152 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
VimP20152 Gm28536-201ENSMUST00000190971 1317 ntBASIC19.66■□□□□ 0.74
VimP20152 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
VimP20152 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
VimP20152 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
VimP20152 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
VimP20152 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
VimP20152 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC19.65■□□□□ 0.74
VimP20152 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
VimP20152 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC19.65■□□□□ 0.74
VimP20152 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
VimP20152 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
VimP20152 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
VimP20152 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
VimP20152 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC19.64■□□□□ 0.74
VimP20152 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
VimP20152 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
VimP20152 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
VimP20152 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
VimP20152 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
VimP20152 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC19.64■□□□□ 0.73
VimP20152 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
VimP20152 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
VimP20152 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
VimP20152 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
VimP20152 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
VimP20152 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
VimP20152 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
VimP20152 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
VimP20152 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
VimP20152 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
VimP20152 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC19.63■□□□□ 0.73
VimP20152 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC19.63■□□□□ 0.73
VimP20152 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
VimP20152 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
VimP20152 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
VimP20152 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
VimP20152 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
VimP20152 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
VimP20152 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
VimP20152 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms