Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
P06344 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
P06344 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
P06344 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
P06344 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
P06344 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
P06344 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
P06344 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC17.29■□□□□ 0.36
P06344 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
P06344 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
P06344 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
P06344 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC17.28■□□□□ 0.36
P06344 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
P06344 Gm10129-202ENSMUST00000193100 1316 ntBASIC17.28■□□□□ 0.36
P06344 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
P06344 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
P06344 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
P06344 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
P06344 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
P06344 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
P06344 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
P06344 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
P06344 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
P06344 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC17.27■□□□□ 0.36
P06344 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC17.27■□□□□ 0.36
P06344 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC17.27■□□□□ 0.35
P06344 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
P06344 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
P06344 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC17.27■□□□□ 0.35
P06344 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
P06344 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC17.27■□□□□ 0.35
P06344 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.35
P06344 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
P06344 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
P06344 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
P06344 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
P06344 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
P06344 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
P06344 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
P06344 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC17.26■□□□□ 0.35
P06344 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC17.26■□□□□ 0.35
P06344 AC099934.2-201ENSMUST00000196389 70 ntBASIC17.26■□□□□ 0.35
P06344 AC156953.1-201ENSMUST00000196953 70 ntBASIC17.26■□□□□ 0.35
P06344 AC157822.2-201ENSMUST00000200291 70 ntBASIC17.26■□□□□ 0.35
P06344 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
P06344 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
P06344 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
P06344 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
P06344 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
P06344 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
P06344 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC17.25■□□□□ 0.35
P06344 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
P06344 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
P06344 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
P06344 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
P06344 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC17.25■□□□□ 0.35
P06344 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
P06344 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
P06344 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
P06344 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
P06344 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
P06344 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
P06344 Gm27801-201ENSMUST00000184174 223 ntBASIC17.24■□□□□ 0.35
P06344 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
P06344 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
P06344 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC17.24■□□□□ 0.35
P06344 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC17.24■□□□□ 0.35
P06344 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
P06344 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
P06344 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
P06344 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
P06344 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
P06344 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC17.24■□□□□ 0.35
P06344 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC17.23■□□□□ 0.35
P06344 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
P06344 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
P06344 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
P06344 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
P06344 AA386476-201ENSMUST00000098781 1665 ntBASIC17.23■□□□□ 0.35
P06344 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
P06344 Gm42911-201ENSMUST00000199360 1630 ntBASIC17.22■□□□□ 0.35
P06344 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
P06344 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
P06344 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
P06344 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC17.22■□□□□ 0.35
P06344 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC17.22■□□□□ 0.35
P06344 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC17.22■□□□□ 0.35
P06344 Hsf1-204ENSMUST00000226872 2104 ntBASIC17.22■□□□□ 0.35
P06344 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
P06344 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
P06344 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
P06344 Gm43909-201ENSMUST00000203443 1876 ntBASIC17.22■□□□□ 0.35
P06344 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
P06344 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
P06344 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
P06344 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
P06344 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
P06344 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC17.21■□□□□ 0.35
P06344 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
P06344 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms