Protein–RNA interactions for Protein: P04946

Ig kappa chain V-V region NQ5-89.4, mousemouse

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04946 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
P04946 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
P04946 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
P04946 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
P04946 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC16.7■□□□□ 0.26
P04946 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
P04946 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
P04946 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
P04946 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
P04946 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
P04946 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
P04946 Gm38205-201ENSMUST00000192243 258 ntBASIC16.69■□□□□ 0.26
P04946 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
P04946 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
P04946 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC16.69■□□□□ 0.26
P04946 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
P04946 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
P04946 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
P04946 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
P04946 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
P04946 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC16.68■□□□□ 0.26
P04946 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC16.68■□□□□ 0.26
P04946 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC16.68■□□□□ 0.26
P04946 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC16.68■□□□□ 0.26
P04946 Gm7514-201ENSMUST00000209475 934 ntBASIC16.68■□□□□ 0.26
P04946 Ap3s1-204ENSMUST00000225520 957 ntBASIC16.68■□□□□ 0.26
P04946 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
P04946 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
P04946 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
P04946 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
P04946 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
P04946 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
P04946 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
P04946 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
P04946 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
P04946 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
P04946 CT010467.1-202ENSMUST00000205406 714 ntBASIC16.67■□□□□ 0.26
P04946 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC16.67■□□□□ 0.26
P04946 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
P04946 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
P04946 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
P04946 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
P04946 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
P04946 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC16.66■□□□□ 0.26
P04946 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC16.66■□□□□ 0.26
P04946 Gm20100-201ENSMUST00000209418 2272 ntBASIC16.66■□□□□ 0.26
P04946 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
P04946 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
P04946 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
P04946 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
P04946 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC16.66■□□□□ 0.26
P04946 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
P04946 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC16.66■□□□□ 0.26
P04946 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
P04946 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
P04946 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
P04946 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
P04946 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
P04946 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
P04946 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
P04946 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
P04946 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
P04946 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC16.65■□□□□ 0.26
P04946 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
P04946 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
P04946 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
P04946 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
P04946 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
P04946 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
P04946 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
P04946 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
P04946 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
P04946 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC16.64■□□□□ 0.25
P04946 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
P04946 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
P04946 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC16.64■□□□□ 0.25
P04946 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
P04946 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
P04946 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC16.64■□□□□ 0.25
P04946 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
P04946 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
P04946 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
P04946 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC16.64■□□□□ 0.25
P04946 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
P04946 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
P04946 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
P04946 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
P04946 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC16.63■□□□□ 0.25
P04946 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
P04946 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
P04946 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
P04946 Gm7860-201ENSMUST00000121190 879 ntBASIC16.63■□□□□ 0.25
P04946 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
P04946 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC16.63■□□□□ 0.25
P04946 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC16.63■□□□□ 0.25
P04946 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
P04946 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
P04946 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
P04946 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
P04946 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms