Protein–RNA interactions for Protein: P04925

Prnp, Major prion protein, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrnpP04925 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PrnpP04925 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC20.22■□□□□ 0.83
PrnpP04925 Gm22240-201ENSMUST00000175225 82 ntBASIC20.22■□□□□ 0.83
PrnpP04925 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC20.22■□□□□ 0.83
PrnpP04925 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC20.22■□□□□ 0.83
PrnpP04925 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PrnpP04925 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PrnpP04925 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
PrnpP04925 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PrnpP04925 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
PrnpP04925 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC20.21■□□□□ 0.83
PrnpP04925 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PrnpP04925 Gm8520-201ENSMUST00000186517 868 ntBASIC20.21■□□□□ 0.83
PrnpP04925 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
PrnpP04925 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
PrnpP04925 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
PrnpP04925 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PrnpP04925 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PrnpP04925 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
PrnpP04925 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PrnpP04925 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PrnpP04925 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PrnpP04925 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
PrnpP04925 Gm37035-201ENSMUST00000194809 2148 ntBASIC20.2■□□□□ 0.82
PrnpP04925 Dmtn-209ENSMUST00000228295 2572 ntBASIC20.2■□□□□ 0.82
PrnpP04925 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
PrnpP04925 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC20.2■□□□□ 0.82
PrnpP04925 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PrnpP04925 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PrnpP04925 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC20.2■□□□□ 0.82
PrnpP04925 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
PrnpP04925 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PrnpP04925 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PrnpP04925 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PrnpP04925 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
PrnpP04925 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC20.19■□□□□ 0.82
PrnpP04925 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PrnpP04925 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PrnpP04925 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
PrnpP04925 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
PrnpP04925 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PrnpP04925 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
PrnpP04925 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
PrnpP04925 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PrnpP04925 Gm7860-201ENSMUST00000121190 879 ntBASIC20.18■□□□□ 0.82
PrnpP04925 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC20.18■□□□□ 0.82
PrnpP04925 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PrnpP04925 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PrnpP04925 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
PrnpP04925 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PrnpP04925 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PrnpP04925 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC20.18■□□□□ 0.82
PrnpP04925 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
PrnpP04925 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PrnpP04925 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
PrnpP04925 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
PrnpP04925 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC20.17■□□□□ 0.82
PrnpP04925 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
PrnpP04925 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC20.17■□□□□ 0.82
PrnpP04925 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PrnpP04925 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PrnpP04925 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PrnpP04925 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC20.17■□□□□ 0.82
PrnpP04925 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
PrnpP04925 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PrnpP04925 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PrnpP04925 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PrnpP04925 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PrnpP04925 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
PrnpP04925 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PrnpP04925 Gm20049-201ENSMUST00000219950 730 ntBASIC20.16■□□□□ 0.82
PrnpP04925 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PrnpP04925 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PrnpP04925 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC20.16■□□□□ 0.82
PrnpP04925 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC20.15■□□□□ 0.82
PrnpP04925 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PrnpP04925 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PrnpP04925 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
PrnpP04925 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PrnpP04925 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
PrnpP04925 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
PrnpP04925 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PrnpP04925 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
PrnpP04925 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
PrnpP04925 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
PrnpP04925 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
PrnpP04925 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
PrnpP04925 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC20.14■□□□□ 0.81
PrnpP04925 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC20.14■□□□□ 0.81
PrnpP04925 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PrnpP04925 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PrnpP04925 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PrnpP04925 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
PrnpP04925 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PrnpP04925 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
PrnpP04925 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PrnpP04925 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.12■□□□□ 0.81
PrnpP04925 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC20.12■□□□□ 0.81
PrnpP04925 AC122769.4-201ENSMUST00000228166 901 ntBASIC20.12■□□□□ 0.81
PrnpP04925 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 99 ms