Protein–RNA interactions for Protein: P04213

T-cell receptor beta chain V region C5 (Fragment), mousemouse

Predictions only

Length 122 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04213 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC18.61■□□□□ 0.57
P04213 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
P04213 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
P04213 Gm12251-201ENSMUST00000117893 792 ntBASIC18.61■□□□□ 0.57
P04213 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC18.61■□□□□ 0.57
P04213 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
P04213 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC18.61■□□□□ 0.57
P04213 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
P04213 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
P04213 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
P04213 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
P04213 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
P04213 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
P04213 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC18.6■□□□□ 0.57
P04213 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
P04213 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
P04213 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
P04213 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
P04213 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
P04213 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC18.6■□□□□ 0.57
P04213 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
P04213 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
P04213 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
P04213 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
P04213 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
P04213 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
P04213 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
P04213 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
P04213 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC18.59■□□□□ 0.57
P04213 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
P04213 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
P04213 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
P04213 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC18.59■□□□□ 0.57
P04213 Gm32699-201ENSMUST00000221728 1988 ntBASIC18.59■□□□□ 0.57
P04213 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
P04213 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
P04213 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
P04213 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
P04213 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
P04213 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
P04213 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
P04213 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
P04213 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC18.58■□□□□ 0.56
P04213 Gm5576-201ENSMUST00000075809 1236 ntBASIC18.58■□□□□ 0.56
P04213 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
P04213 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
P04213 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC18.58■□□□□ 0.56
P04213 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
P04213 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
P04213 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC18.57■□□□□ 0.56
P04213 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
P04213 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
P04213 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
P04213 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
P04213 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
P04213 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC18.57■□□□□ 0.56
P04213 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
P04213 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
P04213 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
P04213 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
P04213 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
P04213 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
P04213 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
P04213 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC18.56■□□□□ 0.56
P04213 Spcs1-204ENSMUST00000226782 949 ntBASIC18.56■□□□□ 0.56
P04213 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
P04213 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
P04213 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
P04213 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
P04213 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
P04213 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
P04213 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
P04213 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC18.55■□□□□ 0.56
P04213 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
P04213 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
P04213 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
P04213 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC18.55■□□□□ 0.56
P04213 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC18.55■□□□□ 0.56
P04213 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
P04213 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
P04213 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
P04213 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
P04213 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC18.54■□□□□ 0.56
P04213 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
P04213 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC18.54■□□□□ 0.56
P04213 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC18.54■□□□□ 0.56
P04213 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
P04213 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
P04213 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
P04213 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
P04213 Gm18688-201ENSMUST00000204695 1859 ntBASIC18.54■□□□□ 0.56
P04213 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
P04213 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC18.54■□□□□ 0.56
P04213 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC18.53■□□□□ 0.56
P04213 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
P04213 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
P04213 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
P04213 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
P04213 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
P04213 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms