Protein–RNA interactions for Protein: O88974

Setdb1, Histone-lysine N-methyltransferase SETDB1, mousemouse

Predictions only

Length 1,307 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Setdb1O88974 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Setdb1O88974 AC135637.1-201ENSMUST00000227750 365 ntBASIC23.79■■□□□ 1.4
Setdb1O88974 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
Setdb1O88974 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC23.79■■□□□ 1.4
Setdb1O88974 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC23.79■■□□□ 1.4
Setdb1O88974 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
Setdb1O88974 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
Setdb1O88974 Gm13181-201ENSMUST00000120117 1069 ntBASIC23.78■■□□□ 1.4
Setdb1O88974 Gm37856-201ENSMUST00000191634 999 ntBASIC23.78■■□□□ 1.4
Setdb1O88974 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC23.78■■□□□ 1.4
Setdb1O88974 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Setdb1O88974 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
Setdb1O88974 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
Setdb1O88974 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Setdb1O88974 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Setdb1O88974 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Setdb1O88974 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Setdb1O88974 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC23.77■■□□□ 1.4
Setdb1O88974 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Setdb1O88974 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC23.77■■□□□ 1.4
Setdb1O88974 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC23.76■■□□□ 1.39
Setdb1O88974 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC23.76■■□□□ 1.39
Setdb1O88974 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Setdb1O88974 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Setdb1O88974 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Setdb1O88974 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Setdb1O88974 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC23.76■■□□□ 1.39
Setdb1O88974 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Setdb1O88974 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC23.76■■□□□ 1.39
Setdb1O88974 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Setdb1O88974 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Setdb1O88974 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Setdb1O88974 Gm10571-201ENSMUST00000097869 1638 ntBASIC23.75■■□□□ 1.39
Setdb1O88974 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC23.75■■□□□ 1.39
Setdb1O88974 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC23.75■■□□□ 1.39
Setdb1O88974 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC23.75■■□□□ 1.39
Setdb1O88974 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC23.75■■□□□ 1.39
Setdb1O88974 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
Setdb1O88974 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Setdb1O88974 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC23.74■■□□□ 1.39
Setdb1O88974 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC23.74■■□□□ 1.39
Setdb1O88974 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC23.74■■□□□ 1.39
Setdb1O88974 Gm15043-201ENSMUST00000118843 1543 ntBASIC23.74■■□□□ 1.39
Setdb1O88974 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
Setdb1O88974 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Setdb1O88974 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Setdb1O88974 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Setdb1O88974 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC23.74■■□□□ 1.39
Setdb1O88974 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Setdb1O88974 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Setdb1O88974 Gm5408-201ENSMUST00000197998 747 ntBASIC23.73■■□□□ 1.39
Setdb1O88974 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Setdb1O88974 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC23.72■■□□□ 1.39
Setdb1O88974 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Setdb1O88974 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC23.72■■□□□ 1.39
Setdb1O88974 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC23.72■■□□□ 1.39
Setdb1O88974 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Setdb1O88974 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Setdb1O88974 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC23.71■■□□□ 1.39
Setdb1O88974 Gm43006-201ENSMUST00000197702 1602 ntBASIC23.71■■□□□ 1.39
Setdb1O88974 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Setdb1O88974 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC23.71■■□□□ 1.39
Setdb1O88974 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Setdb1O88974 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Setdb1O88974 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Setdb1O88974 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Setdb1O88974 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Setdb1O88974 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC23.71■■□□□ 1.39
Setdb1O88974 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Setdb1O88974 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC23.7■■□□□ 1.39
Setdb1O88974 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Setdb1O88974 Gm7290-201ENSMUST00000104990 617 ntBASIC23.7■■□□□ 1.38
Setdb1O88974 Gm12918-201ENSMUST00000120234 636 ntBASIC23.7■■□□□ 1.38
Setdb1O88974 Gm15710-201ENSMUST00000121821 636 ntBASIC23.7■■□□□ 1.38
Setdb1O88974 Gm5075-201ENSMUST00000196916 622 ntBASIC23.7■■□□□ 1.38
Setdb1O88974 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC23.7■■□□□ 1.38
Setdb1O88974 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC23.7■■□□□ 1.38
Setdb1O88974 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC23.7■■□□□ 1.38
Setdb1O88974 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Setdb1O88974 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Setdb1O88974 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Setdb1O88974 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC23.69■■□□□ 1.38
Setdb1O88974 Cdkn3-203ENSMUST00000227149 1952 ntBASIC23.69■■□□□ 1.38
Setdb1O88974 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC23.69■■□□□ 1.38
Setdb1O88974 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Setdb1O88974 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC23.69■■□□□ 1.38
Setdb1O88974 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Setdb1O88974 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
Setdb1O88974 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC23.68■■□□□ 1.38
Setdb1O88974 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Setdb1O88974 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC23.68■■□□□ 1.38
Setdb1O88974 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC23.68■■□□□ 1.38
Setdb1O88974 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
Setdb1O88974 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Setdb1O88974 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC23.68■■□□□ 1.38
Setdb1O88974 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Setdb1O88974 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
Setdb1O88974 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC23.67■■□□□ 1.38
Setdb1O88974 Gm13146-201ENSMUST00000118508 780 ntBASIC23.67■■□□□ 1.38
Setdb1O88974 Gm13836-201ENSMUST00000121159 501 ntBASIC23.67■■□□□ 1.38
Retrieved 100 of 76,532 protein–RNA pairs in 130 ms