Protein–RNA interactions for Protein: O88834

Shd, SH2 domain-containing adapter protein D, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShdO88834 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC19.81■□□□□ 0.76
ShdO88834 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
ShdO88834 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ShdO88834 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
ShdO88834 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
ShdO88834 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ShdO88834 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
ShdO88834 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
ShdO88834 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ShdO88834 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC19.79■□□□□ 0.76
ShdO88834 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
ShdO88834 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ShdO88834 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
ShdO88834 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ShdO88834 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ShdO88834 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
ShdO88834 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
ShdO88834 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ShdO88834 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
ShdO88834 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC19.79■□□□□ 0.76
ShdO88834 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC19.79■□□□□ 0.76
ShdO88834 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
ShdO88834 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
ShdO88834 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
ShdO88834 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ShdO88834 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ShdO88834 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ShdO88834 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC19.78■□□□□ 0.76
ShdO88834 Smad6-203ENSMUST00000179458 273 ntBASIC19.78■□□□□ 0.76
ShdO88834 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC19.78■□□□□ 0.76
ShdO88834 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ShdO88834 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
ShdO88834 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
ShdO88834 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
ShdO88834 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
ShdO88834 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
ShdO88834 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
ShdO88834 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
ShdO88834 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
ShdO88834 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
ShdO88834 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
ShdO88834 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
ShdO88834 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ShdO88834 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ShdO88834 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
ShdO88834 Gm43017-201ENSMUST00000198296 752 ntBASIC19.76■□□□□ 0.75
ShdO88834 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC19.76■□□□□ 0.75
ShdO88834 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ShdO88834 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ShdO88834 Gm10571-201ENSMUST00000097869 1638 ntBASIC19.76■□□□□ 0.75
ShdO88834 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
ShdO88834 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ShdO88834 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
ShdO88834 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ShdO88834 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ShdO88834 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC19.75■□□□□ 0.75
ShdO88834 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ShdO88834 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
ShdO88834 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
ShdO88834 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ShdO88834 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
ShdO88834 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ShdO88834 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ShdO88834 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ShdO88834 Gm45640-201ENSMUST00000210665 1896 ntBASIC19.74■□□□□ 0.75
ShdO88834 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC19.74■□□□□ 0.75
ShdO88834 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ShdO88834 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ShdO88834 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
ShdO88834 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
ShdO88834 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC19.73■□□□□ 0.75
ShdO88834 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ShdO88834 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ShdO88834 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
ShdO88834 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC19.73■□□□□ 0.75
ShdO88834 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
ShdO88834 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ShdO88834 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
ShdO88834 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
ShdO88834 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ShdO88834 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
ShdO88834 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
ShdO88834 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ShdO88834 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
ShdO88834 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ShdO88834 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
ShdO88834 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
ShdO88834 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC19.72■□□□□ 0.75
ShdO88834 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
ShdO88834 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
ShdO88834 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC19.72■□□□□ 0.75
ShdO88834 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ShdO88834 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ShdO88834 Gm32699-201ENSMUST00000221728 1988 ntBASIC19.72■□□□□ 0.75
ShdO88834 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
ShdO88834 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC19.71■□□□□ 0.75
ShdO88834 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC19.71■□□□□ 0.75
ShdO88834 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
ShdO88834 Gm11421-201ENSMUST00000122124 294 ntBASIC19.71■□□□□ 0.75
ShdO88834 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 15.1 ms