Protein–RNA interactions for Protein: O88705

Hcn3, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn3O88705 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC18.52■□□□□ 0.55
Hcn3O88705 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Hcn3O88705 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Hcn3O88705 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Hcn3O88705 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Hcn3O88705 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC18.51■□□□□ 0.55
Hcn3O88705 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Hcn3O88705 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Hcn3O88705 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Hcn3O88705 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC18.51■□□□□ 0.55
Hcn3O88705 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC18.51■□□□□ 0.55
Hcn3O88705 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC18.51■□□□□ 0.55
Hcn3O88705 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Hcn3O88705 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Hcn3O88705 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Hcn3O88705 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Hcn3O88705 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Hcn3O88705 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Hcn3O88705 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Hcn3O88705 Gm45141-201ENSMUST00000206502 1888 ntBASIC18.5■□□□□ 0.55
Hcn3O88705 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Hcn3O88705 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Hcn3O88705 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Hcn3O88705 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Hcn3O88705 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Hcn3O88705 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Hcn3O88705 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Hcn3O88705 Gm45606-201ENSMUST00000209836 2795 ntBASIC18.49■□□□□ 0.55
Hcn3O88705 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Hcn3O88705 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC18.49■□□□□ 0.55
Hcn3O88705 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC18.49■□□□□ 0.55
Hcn3O88705 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Hcn3O88705 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Hcn3O88705 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Hcn3O88705 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Hcn3O88705 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Hcn3O88705 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Hcn3O88705 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Hcn3O88705 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Hcn3O88705 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Hcn3O88705 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Hcn3O88705 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC18.48■□□□□ 0.55
Hcn3O88705 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC18.48■□□□□ 0.55
Hcn3O88705 Gm40881-201ENSMUST00000223397 166 ntBASIC18.48■□□□□ 0.55
Hcn3O88705 AC124603.1-201ENSMUST00000223843 308 ntBASIC18.48■□□□□ 0.55
Hcn3O88705 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Hcn3O88705 Gm9959-201ENSMUST00000068277 390 ntBASIC18.48■□□□□ 0.55
Hcn3O88705 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC18.48■□□□□ 0.55
Hcn3O88705 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
Hcn3O88705 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Hcn3O88705 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Hcn3O88705 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Hcn3O88705 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Hcn3O88705 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Hcn3O88705 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC18.48■□□□□ 0.55
Hcn3O88705 Gm18688-201ENSMUST00000204695 1859 ntBASIC18.48■□□□□ 0.55
Hcn3O88705 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Hcn3O88705 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Hcn3O88705 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC18.47■□□□□ 0.55
Hcn3O88705 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Hcn3O88705 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Hcn3O88705 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Hcn3O88705 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Hcn3O88705 Rncr4-201ENSMUST00000194541 2234 ntBASIC18.47■□□□□ 0.55
Hcn3O88705 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Hcn3O88705 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Hcn3O88705 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Hcn3O88705 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Hcn3O88705 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
Hcn3O88705 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Hcn3O88705 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Hcn3O88705 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Hcn3O88705 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Hcn3O88705 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC18.46■□□□□ 0.55
Hcn3O88705 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Hcn3O88705 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Hcn3O88705 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Hcn3O88705 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC18.46■□□□□ 0.55
Hcn3O88705 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Hcn3O88705 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC18.46■□□□□ 0.54
Hcn3O88705 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Hcn3O88705 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Hcn3O88705 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Hcn3O88705 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Hcn3O88705 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Hcn3O88705 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Hcn3O88705 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Hcn3O88705 Etf1-202ENSMUST00000180351 108 ntBASIC18.45■□□□□ 0.54
Hcn3O88705 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Hcn3O88705 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC18.45■□□□□ 0.54
Hcn3O88705 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Hcn3O88705 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Hcn3O88705 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Hcn3O88705 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC18.45■□□□□ 0.54
Hcn3O88705 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Hcn3O88705 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Hcn3O88705 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Hcn3O88705 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
Hcn3O88705 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Hcn3O88705 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms