Protein–RNA interactions for Protein: O88696

Clpp, ATP-dependent Clp protease proteolytic subunit, mitochondrial, mousemouse

Predictions only

Length 272 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClppO88696 Gm27405-201ENSMUST00000184201 112 ntBASIC18.8■□□□□ 0.6
ClppO88696 Gm7291-201ENSMUST00000199147 382 ntBASIC18.8■□□□□ 0.6
ClppO88696 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
ClppO88696 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
ClppO88696 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ClppO88696 Gm19439-201ENSMUST00000198195 2273 ntBASIC18.8■□□□□ 0.6
ClppO88696 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ClppO88696 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ClppO88696 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ClppO88696 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
ClppO88696 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ClppO88696 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC18.79■□□□□ 0.6
ClppO88696 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC18.79■□□□□ 0.6
ClppO88696 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
ClppO88696 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ClppO88696 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ClppO88696 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC18.78■□□□□ 0.6
ClppO88696 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
ClppO88696 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
ClppO88696 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC18.78■□□□□ 0.6
ClppO88696 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
ClppO88696 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
ClppO88696 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ClppO88696 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ClppO88696 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ClppO88696 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ClppO88696 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC18.77■□□□□ 0.6
ClppO88696 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ClppO88696 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
ClppO88696 Gm42569-201ENSMUST00000200539 472 ntBASIC18.76■□□□□ 0.59
ClppO88696 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC18.76■□□□□ 0.59
ClppO88696 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ClppO88696 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
ClppO88696 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
ClppO88696 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ClppO88696 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ClppO88696 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
ClppO88696 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ClppO88696 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
ClppO88696 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
ClppO88696 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC18.75■□□□□ 0.59
ClppO88696 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC18.75■□□□□ 0.59
ClppO88696 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
ClppO88696 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
ClppO88696 Grk6-206ENSMUST00000224995 2971 ntBASIC18.75■□□□□ 0.59
ClppO88696 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ClppO88696 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
ClppO88696 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
ClppO88696 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ClppO88696 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
ClppO88696 Ddx41-204ENSMUST00000224765 2199 ntBASIC18.74■□□□□ 0.59
ClppO88696 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC18.74■□□□□ 0.59
ClppO88696 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC18.74■□□□□ 0.59
ClppO88696 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC18.74■□□□□ 0.59
ClppO88696 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ClppO88696 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC18.74■□□□□ 0.59
ClppO88696 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC18.74■□□□□ 0.59
ClppO88696 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ClppO88696 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ClppO88696 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
ClppO88696 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ClppO88696 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
ClppO88696 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
ClppO88696 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ClppO88696 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
ClppO88696 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ClppO88696 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
ClppO88696 Gm18671-201ENSMUST00000214826 683 ntBASIC18.73■□□□□ 0.59
ClppO88696 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ClppO88696 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
ClppO88696 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
ClppO88696 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
ClppO88696 AC122428.2-201ENSMUST00000216321 1832 ntBASIC18.72■□□□□ 0.59
ClppO88696 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
ClppO88696 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
ClppO88696 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ClppO88696 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ClppO88696 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC18.72■□□□□ 0.59
ClppO88696 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ClppO88696 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ClppO88696 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ClppO88696 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ClppO88696 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ClppO88696 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ClppO88696 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ClppO88696 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC18.71■□□□□ 0.59
ClppO88696 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ClppO88696 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ClppO88696 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ClppO88696 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC18.71■□□□□ 0.59
ClppO88696 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ClppO88696 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC18.71■□□□□ 0.59
ClppO88696 Gm26571-201ENSMUST00000181399 666 ntBASIC18.71■□□□□ 0.59
ClppO88696 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
ClppO88696 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
ClppO88696 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
ClppO88696 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.58
ClppO88696 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ClppO88696 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
ClppO88696 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms