Protein–RNA interactions for Protein: O88609

Lmx1b, LIM homeobox transcription factor 1-beta, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmx1bO88609 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC17.55■□□□□ 0.4
Lmx1bO88609 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC17.55■□□□□ 0.4
Lmx1bO88609 Gm5297-201ENSMUST00000198555 1171 ntBASIC17.55■□□□□ 0.4
Lmx1bO88609 Gm42778-201ENSMUST00000199644 553 ntBASIC17.55■□□□□ 0.4
Lmx1bO88609 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC17.55■□□□□ 0.4
Lmx1bO88609 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC17.55■□□□□ 0.4
Lmx1bO88609 Gm18671-201ENSMUST00000214826 683 ntBASIC17.55■□□□□ 0.4
Lmx1bO88609 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC17.55■□□□□ 0.4
Lmx1bO88609 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Lmx1bO88609 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Lmx1bO88609 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lmx1bO88609 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
Lmx1bO88609 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lmx1bO88609 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Lmx1bO88609 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC17.54■□□□□ 0.4
Lmx1bO88609 Gm27405-201ENSMUST00000184201 112 ntBASIC17.54■□□□□ 0.4
Lmx1bO88609 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC17.54■□□□□ 0.4
Lmx1bO88609 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Lmx1bO88609 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lmx1bO88609 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lmx1bO88609 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lmx1bO88609 Gm9988-201ENSMUST00000069786 435 ntBASIC17.54■□□□□ 0.4
Lmx1bO88609 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Lmx1bO88609 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lmx1bO88609 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Lmx1bO88609 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lmx1bO88609 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lmx1bO88609 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lmx1bO88609 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lmx1bO88609 Gm10033-202ENSMUST00000211874 928 ntBASIC17.53■□□□□ 0.4
Lmx1bO88609 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lmx1bO88609 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Lmx1bO88609 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Lmx1bO88609 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC17.53■□□□□ 0.4
Lmx1bO88609 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lmx1bO88609 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Lmx1bO88609 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Lmx1bO88609 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Lmx1bO88609 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Lmx1bO88609 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Lmx1bO88609 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Lmx1bO88609 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC17.52■□□□□ 0.4
Lmx1bO88609 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.4
Lmx1bO88609 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC17.52■□□□□ 0.4
Lmx1bO88609 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Lmx1bO88609 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Lmx1bO88609 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC17.52■□□□□ 0.4
Lmx1bO88609 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Lmx1bO88609 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.39
Lmx1bO88609 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC17.52■□□□□ 0.39
Lmx1bO88609 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Lmx1bO88609 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
Lmx1bO88609 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Lmx1bO88609 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Lmx1bO88609 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
Lmx1bO88609 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Lmx1bO88609 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Lmx1bO88609 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC17.51■□□□□ 0.39
Lmx1bO88609 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC17.51■□□□□ 0.39
Lmx1bO88609 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Lmx1bO88609 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Lmx1bO88609 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Lmx1bO88609 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Lmx1bO88609 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Lmx1bO88609 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Lmx1bO88609 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Lmx1bO88609 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Lmx1bO88609 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC17.5■□□□□ 0.39
Lmx1bO88609 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Lmx1bO88609 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC17.5■□□□□ 0.39
Lmx1bO88609 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Lmx1bO88609 Gm10571-201ENSMUST00000097869 1638 ntBASIC17.5■□□□□ 0.39
Lmx1bO88609 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Lmx1bO88609 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Lmx1bO88609 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Lmx1bO88609 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
Lmx1bO88609 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Lmx1bO88609 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Lmx1bO88609 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC17.49■□□□□ 0.39
Lmx1bO88609 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Lmx1bO88609 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Lmx1bO88609 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Lmx1bO88609 AV356131-201ENSMUST00000206201 750 ntBASIC17.49■□□□□ 0.39
Lmx1bO88609 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC17.49■□□□□ 0.39
Lmx1bO88609 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Lmx1bO88609 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Lmx1bO88609 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC17.49■□□□□ 0.39
Lmx1bO88609 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Lmx1bO88609 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Lmx1bO88609 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Lmx1bO88609 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC17.49■□□□□ 0.39
Lmx1bO88609 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Lmx1bO88609 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Lmx1bO88609 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Lmx1bO88609 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Lmx1bO88609 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Lmx1bO88609 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Lmx1bO88609 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Lmx1bO88609 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC17.48■□□□□ 0.39
Lmx1bO88609 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms