Protein–RNA interactions for Protein: O88552

Cldn2, Claudin-2, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn2O88552 AC152827.1-201ENSMUST00000221143 2189 ntBASIC19.81■□□□□ 0.76
Cldn2O88552 Gm13042-201ENSMUST00000119244 1955 ntBASIC19.81■□□□□ 0.76
Cldn2O88552 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cldn2O88552 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cldn2O88552 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cldn2O88552 Gm12441-201ENSMUST00000121806 588 ntBASIC19.81■□□□□ 0.76
Cldn2O88552 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
Cldn2O88552 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Cldn2O88552 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cldn2O88552 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Cldn2O88552 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Cldn2O88552 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
Cldn2O88552 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC19.8■□□□□ 0.76
Cldn2O88552 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Cldn2O88552 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Cldn2O88552 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cldn2O88552 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cldn2O88552 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cldn2O88552 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cldn2O88552 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cldn2O88552 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cldn2O88552 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC19.79■□□□□ 0.76
Cldn2O88552 Gm13148-201ENSMUST00000118892 745 ntBASIC19.79■□□□□ 0.76
Cldn2O88552 Gm10653-202ENSMUST00000139570 835 ntBASIC19.79■□□□□ 0.76
Cldn2O88552 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC19.79■□□□□ 0.76
Cldn2O88552 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cldn2O88552 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Cldn2O88552 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC19.78■□□□□ 0.76
Cldn2O88552 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cldn2O88552 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cldn2O88552 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Cldn2O88552 Gm6365-201ENSMUST00000054711 744 ntBASIC19.78■□□□□ 0.76
Cldn2O88552 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cldn2O88552 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Cldn2O88552 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC19.78■□□□□ 0.76
Cldn2O88552 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cldn2O88552 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Cldn2O88552 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Cldn2O88552 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Cldn2O88552 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cldn2O88552 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC19.77■□□□□ 0.76
Cldn2O88552 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC19.77■□□□□ 0.76
Cldn2O88552 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cldn2O88552 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cldn2O88552 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Cldn2O88552 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC19.77■□□□□ 0.76
Cldn2O88552 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Cldn2O88552 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC19.77■□□□□ 0.76
Cldn2O88552 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC19.77■□□□□ 0.76
Cldn2O88552 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cldn2O88552 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cldn2O88552 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC19.77■□□□□ 0.76
Cldn2O88552 Gm4968-201ENSMUST00000071458 858 ntBASIC19.77■□□□□ 0.76
Cldn2O88552 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC19.77■□□□□ 0.76
Cldn2O88552 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cldn2O88552 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Cldn2O88552 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC19.77■□□□□ 0.75
Cldn2O88552 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Cldn2O88552 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.75
Cldn2O88552 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC19.76■□□□□ 0.75
Cldn2O88552 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Cldn2O88552 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Cldn2O88552 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Cldn2O88552 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Cldn2O88552 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Cldn2O88552 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Cldn2O88552 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cldn2O88552 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC19.76■□□□□ 0.75
Cldn2O88552 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cldn2O88552 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Cldn2O88552 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC19.76■□□□□ 0.75
Cldn2O88552 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Cldn2O88552 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC19.76■□□□□ 0.75
Cldn2O88552 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cldn2O88552 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cldn2O88552 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Cldn2O88552 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cldn2O88552 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC19.75■□□□□ 0.75
Cldn2O88552 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Cldn2O88552 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cldn2O88552 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
Cldn2O88552 Gm13534-201ENSMUST00000121169 513 ntBASIC19.75■□□□□ 0.75
Cldn2O88552 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cldn2O88552 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC19.75■□□□□ 0.75
Cldn2O88552 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC19.75■□□□□ 0.75
Cldn2O88552 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cldn2O88552 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Cldn2O88552 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cldn2O88552 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cldn2O88552 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Cldn2O88552 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cldn2O88552 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Cldn2O88552 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC19.74■□□□□ 0.75
Cldn2O88552 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Cldn2O88552 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cldn2O88552 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Cldn2O88552 Gm43859-201ENSMUST00000200075 1412 ntBASIC19.74■□□□□ 0.75
Cldn2O88552 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC19.74■□□□□ 0.75
Cldn2O88552 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cldn2O88552 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms