Protein–RNA interactions for Protein: O88545

Cops6, COP9 signalosome complex subunit 6, mousemouse

Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops6O88545 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC23.8■■□□□ 1.4
Cops6O88545 Gm6365-201ENSMUST00000054711 744 ntBASIC23.8■■□□□ 1.4
Cops6O88545 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
Cops6O88545 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Cops6O88545 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Cops6O88545 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
Cops6O88545 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
Cops6O88545 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC23.8■■□□□ 1.4
Cops6O88545 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Cops6O88545 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Cops6O88545 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Cops6O88545 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC23.79■■□□□ 1.4
Cops6O88545 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Cops6O88545 Nespas-201ENSMUST00000143738 1083 ntBASIC23.79■■□□□ 1.4
Cops6O88545 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
Cops6O88545 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Cops6O88545 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC23.79■■□□□ 1.4
Cops6O88545 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Cops6O88545 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC23.79■■□□□ 1.4
Cops6O88545 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Cops6O88545 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
Cops6O88545 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Cops6O88545 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Cops6O88545 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC23.78■■□□□ 1.4
Cops6O88545 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Cops6O88545 Gm13148-201ENSMUST00000118892 745 ntBASIC23.78■■□□□ 1.4
Cops6O88545 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC23.78■■□□□ 1.4
Cops6O88545 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC23.78■■□□□ 1.4
Cops6O88545 Gm4968-201ENSMUST00000071458 858 ntBASIC23.78■■□□□ 1.4
Cops6O88545 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
Cops6O88545 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
Cops6O88545 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Cops6O88545 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
Cops6O88545 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
Cops6O88545 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
Cops6O88545 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC23.77■■□□□ 1.4
Cops6O88545 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC23.77■■□□□ 1.4
Cops6O88545 Gm7860-201ENSMUST00000121190 879 ntBASIC23.77■■□□□ 1.4
Cops6O88545 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Cops6O88545 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC23.77■■□□□ 1.4
Cops6O88545 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Cops6O88545 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Cops6O88545 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
Cops6O88545 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Cops6O88545 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
Cops6O88545 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Cops6O88545 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
Cops6O88545 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
Cops6O88545 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Cops6O88545 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
Cops6O88545 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC23.75■■□□□ 1.39
Cops6O88545 Gm7290-201ENSMUST00000104990 617 ntBASIC23.75■■□□□ 1.39
Cops6O88545 Gm12918-201ENSMUST00000120234 636 ntBASIC23.75■■□□□ 1.39
Cops6O88545 Gm15710-201ENSMUST00000121821 636 ntBASIC23.75■■□□□ 1.39
Cops6O88545 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
Cops6O88545 Gm5075-201ENSMUST00000196916 622 ntBASIC23.75■■□□□ 1.39
Cops6O88545 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC23.75■■□□□ 1.39
Cops6O88545 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC23.75■■□□□ 1.39
Cops6O88545 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC23.75■■□□□ 1.39
Cops6O88545 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Cops6O88545 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Cops6O88545 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
Cops6O88545 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC23.75■■□□□ 1.39
Cops6O88545 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Cops6O88545 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Cops6O88545 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Cops6O88545 Gm3807-201ENSMUST00000193520 1168 ntBASIC23.74■■□□□ 1.39
Cops6O88545 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC23.74■■□□□ 1.39
Cops6O88545 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Cops6O88545 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Cops6O88545 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Cops6O88545 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Cops6O88545 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Cops6O88545 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Cops6O88545 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
Cops6O88545 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Cops6O88545 Gm20100-201ENSMUST00000209418 2272 ntBASIC23.73■■□□□ 1.39
Cops6O88545 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Cops6O88545 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC23.73■■□□□ 1.39
Cops6O88545 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Cops6O88545 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Cops6O88545 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Cops6O88545 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC23.72■■□□□ 1.39
Cops6O88545 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Cops6O88545 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC23.72■■□□□ 1.39
Cops6O88545 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC23.72■■□□□ 1.39
Cops6O88545 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC23.71■■□□□ 1.39
Cops6O88545 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC23.71■■□□□ 1.39
Cops6O88545 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Cops6O88545 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Cops6O88545 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC23.71■■□□□ 1.39
Cops6O88545 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Cops6O88545 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Cops6O88545 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Cops6O88545 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Cops6O88545 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC23.7■■□□□ 1.38
Cops6O88545 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC23.7■■□□□ 1.38
Cops6O88545 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Cops6O88545 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Cops6O88545 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms