Protein–RNA interactions for Protein: O88509

Dnmt3b, DNA (cytosine-5)-methyltransferase 3B, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dnmt3bO88509 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Dnmt3bO88509 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Dnmt3bO88509 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Dnmt3bO88509 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Dnmt3bO88509 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Dnmt3bO88509 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Dnmt3bO88509 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC18.67■□□□□ 0.58
Dnmt3bO88509 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Dnmt3bO88509 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Dnmt3bO88509 Gm6139-201ENSMUST00000079261 882 ntBASIC18.67■□□□□ 0.58
Dnmt3bO88509 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Dnmt3bO88509 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Dnmt3bO88509 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Dnmt3bO88509 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Dnmt3bO88509 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC18.67■□□□□ 0.58
Dnmt3bO88509 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Dnmt3bO88509 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Dnmt3bO88509 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Dnmt3bO88509 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Dnmt3bO88509 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Dnmt3bO88509 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC18.66■□□□□ 0.58
Dnmt3bO88509 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
Dnmt3bO88509 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC18.66■□□□□ 0.58
Dnmt3bO88509 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Dnmt3bO88509 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Dnmt3bO88509 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC18.66■□□□□ 0.58
Dnmt3bO88509 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Dnmt3bO88509 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Dnmt3bO88509 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
Dnmt3bO88509 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Dnmt3bO88509 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Dnmt3bO88509 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Dnmt3bO88509 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Dnmt3bO88509 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Dnmt3bO88509 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Dnmt3bO88509 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Dnmt3bO88509 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Dnmt3bO88509 Gm2011-201ENSMUST00000203124 1263 ntBASIC18.65■□□□□ 0.58
Dnmt3bO88509 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC18.65■□□□□ 0.58
Dnmt3bO88509 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Dnmt3bO88509 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Dnmt3bO88509 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC18.65■□□□□ 0.58
Dnmt3bO88509 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
Dnmt3bO88509 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Dnmt3bO88509 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Dnmt3bO88509 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.58
Dnmt3bO88509 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Dnmt3bO88509 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Dnmt3bO88509 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Dnmt3bO88509 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Dnmt3bO88509 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Dnmt3bO88509 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Dnmt3bO88509 Gm9870-201ENSMUST00000063874 645 ntBASIC18.64■□□□□ 0.57
Dnmt3bO88509 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Dnmt3bO88509 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Dnmt3bO88509 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Dnmt3bO88509 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Dnmt3bO88509 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Dnmt3bO88509 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Dnmt3bO88509 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Dnmt3bO88509 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Dnmt3bO88509 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Dnmt3bO88509 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Dnmt3bO88509 Gm35558-201ENSMUST00000222675 2219 ntBASIC18.63■□□□□ 0.57
Dnmt3bO88509 Gm5953-201ENSMUST00000220644 2616 ntBASIC18.63■□□□□ 0.57
Dnmt3bO88509 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Dnmt3bO88509 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Dnmt3bO88509 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Dnmt3bO88509 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Dnmt3bO88509 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Dnmt3bO88509 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Dnmt3bO88509 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Dnmt3bO88509 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Dnmt3bO88509 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC18.62■□□□□ 0.57
Dnmt3bO88509 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Dnmt3bO88509 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Dnmt3bO88509 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC18.62■□□□□ 0.57
Dnmt3bO88509 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Dnmt3bO88509 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
Dnmt3bO88509 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC18.62■□□□□ 0.57
Dnmt3bO88509 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Dnmt3bO88509 Gm21168-201ENSMUST00000199646 1096 ntBASIC18.62■□□□□ 0.57
Dnmt3bO88509 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Dnmt3bO88509 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Dnmt3bO88509 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Dnmt3bO88509 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Dnmt3bO88509 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Dnmt3bO88509 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Dnmt3bO88509 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Dnmt3bO88509 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Dnmt3bO88509 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Dnmt3bO88509 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Dnmt3bO88509 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Dnmt3bO88509 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Dnmt3bO88509 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC18.61■□□□□ 0.57
Dnmt3bO88509 Gm43137-201ENSMUST00000198052 594 ntBASIC18.61■□□□□ 0.57
Dnmt3bO88509 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC18.61■□□□□ 0.57
Dnmt3bO88509 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Dnmt3bO88509 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Dnmt3bO88509 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC18.6■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms