Protein–RNA interactions for Protein: O88393

Tgfbr3, Transforming growth factor beta receptor type 3, mousemouse

Predictions only

Length 850 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tgfbr3O88393 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Tgfbr3O88393 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Tgfbr3O88393 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Tgfbr3O88393 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Tgfbr3O88393 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Tgfbr3O88393 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Tgfbr3O88393 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Tgfbr3O88393 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Tgfbr3O88393 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Tgfbr3O88393 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Tgfbr3O88393 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Tgfbr3O88393 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Tgfbr3O88393 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Tgfbr3O88393 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Tgfbr3O88393 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Tgfbr3O88393 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Tgfbr3O88393 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Tgfbr3O88393 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Tgfbr3O88393 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC18.49■□□□□ 0.55
Tgfbr3O88393 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Tgfbr3O88393 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Tgfbr3O88393 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Tgfbr3O88393 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Tgfbr3O88393 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Tgfbr3O88393 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Tgfbr3O88393 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
Tgfbr3O88393 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC18.48■□□□□ 0.55
Tgfbr3O88393 Gm6211-202ENSMUST00000167849 925 ntBASIC18.48■□□□□ 0.55
Tgfbr3O88393 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Tgfbr3O88393 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC18.48■□□□□ 0.55
Tgfbr3O88393 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Tgfbr3O88393 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Tgfbr3O88393 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Tgfbr3O88393 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Tgfbr3O88393 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC18.48■□□□□ 0.55
Tgfbr3O88393 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Tgfbr3O88393 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Tgfbr3O88393 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Tgfbr3O88393 Gm8520-201ENSMUST00000186517 868 ntBASIC18.47■□□□□ 0.55
Tgfbr3O88393 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Tgfbr3O88393 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC18.47■□□□□ 0.55
Tgfbr3O88393 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Tgfbr3O88393 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Tgfbr3O88393 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Tgfbr3O88393 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Tgfbr3O88393 Cdkn3-203ENSMUST00000227149 1952 ntBASIC18.46■□□□□ 0.55
Tgfbr3O88393 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Tgfbr3O88393 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Tgfbr3O88393 Gm20049-201ENSMUST00000219950 730 ntBASIC18.46■□□□□ 0.55
Tgfbr3O88393 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Tgfbr3O88393 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Tgfbr3O88393 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Tgfbr3O88393 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Tgfbr3O88393 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Tgfbr3O88393 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Tgfbr3O88393 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Tgfbr3O88393 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Tgfbr3O88393 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Tgfbr3O88393 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC18.45■□□□□ 0.54
Tgfbr3O88393 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Tgfbr3O88393 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Tgfbr3O88393 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Tgfbr3O88393 Gm15043-201ENSMUST00000118843 1543 ntBASIC18.45■□□□□ 0.54
Tgfbr3O88393 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Tgfbr3O88393 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC18.45■□□□□ 0.54
Tgfbr3O88393 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Tgfbr3O88393 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Tgfbr3O88393 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
Tgfbr3O88393 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC18.45■□□□□ 0.54
Tgfbr3O88393 Gm43909-201ENSMUST00000203443 1876 ntBASIC18.45■□□□□ 0.54
Tgfbr3O88393 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Tgfbr3O88393 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC18.45■□□□□ 0.54
Tgfbr3O88393 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Tgfbr3O88393 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
Tgfbr3O88393 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
Tgfbr3O88393 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC18.44■□□□□ 0.54
Tgfbr3O88393 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Tgfbr3O88393 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC18.44■□□□□ 0.54
Tgfbr3O88393 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Tgfbr3O88393 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Tgfbr3O88393 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Tgfbr3O88393 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Tgfbr3O88393 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Tgfbr3O88393 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Tgfbr3O88393 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Tgfbr3O88393 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Tgfbr3O88393 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Tgfbr3O88393 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Tgfbr3O88393 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC18.43■□□□□ 0.54
Tgfbr3O88393 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Tgfbr3O88393 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Tgfbr3O88393 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Tgfbr3O88393 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Tgfbr3O88393 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Tgfbr3O88393 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Tgfbr3O88393 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Tgfbr3O88393 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Tgfbr3O88393 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
Tgfbr3O88393 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Tgfbr3O88393 Gm12504-201ENSMUST00000120860 2231 ntBASIC18.42■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms