Protein–RNA interactions for Protein: O55134

Pcdh12, Protocadherin-12, mousemouse

Predictions only

Length 1,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh12O55134 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdh12O55134 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC17.54■□□□□ 0.4
Pcdh12O55134 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdh12O55134 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC17.53■□□□□ 0.4
Pcdh12O55134 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdh12O55134 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC17.53■□□□□ 0.4
Pcdh12O55134 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdh12O55134 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdh12O55134 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdh12O55134 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC17.53■□□□□ 0.4
Pcdh12O55134 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdh12O55134 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdh12O55134 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdh12O55134 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
Pcdh12O55134 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC17.53■□□□□ 0.4
Pcdh12O55134 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC17.53■□□□□ 0.4
Pcdh12O55134 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdh12O55134 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdh12O55134 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
Pcdh12O55134 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdh12O55134 Gm5112-201ENSMUST00000204407 2368 ntBASIC17.53■□□□□ 0.4
Pcdh12O55134 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdh12O55134 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdh12O55134 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdh12O55134 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdh12O55134 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdh12O55134 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdh12O55134 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdh12O55134 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdh12O55134 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdh12O55134 Flvcr1-202ENSMUST00000191946 1216 ntBASIC17.52■□□□□ 0.4
Pcdh12O55134 Gm43017-201ENSMUST00000198296 752 ntBASIC17.52■□□□□ 0.4
Pcdh12O55134 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC17.52■□□□□ 0.4
Pcdh12O55134 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdh12O55134 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Pcdh12O55134 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Pcdh12O55134 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
Pcdh12O55134 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdh12O55134 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdh12O55134 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdh12O55134 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdh12O55134 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC17.51■□□□□ 0.39
Pcdh12O55134 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdh12O55134 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdh12O55134 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdh12O55134 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC17.51■□□□□ 0.39
Pcdh12O55134 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdh12O55134 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdh12O55134 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdh12O55134 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC17.51■□□□□ 0.39
Pcdh12O55134 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdh12O55134 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdh12O55134 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdh12O55134 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC17.5■□□□□ 0.39
Pcdh12O55134 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdh12O55134 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdh12O55134 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
Pcdh12O55134 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdh12O55134 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Pcdh12O55134 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdh12O55134 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdh12O55134 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdh12O55134 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdh12O55134 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdh12O55134 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC17.49■□□□□ 0.39
Pcdh12O55134 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
Pcdh12O55134 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC17.49■□□□□ 0.39
Pcdh12O55134 Gm21168-201ENSMUST00000199646 1096 ntBASIC17.49■□□□□ 0.39
Pcdh12O55134 Gm2011-201ENSMUST00000203124 1263 ntBASIC17.49■□□□□ 0.39
Pcdh12O55134 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdh12O55134 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Pcdh12O55134 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Pcdh12O55134 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdh12O55134 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Pcdh12O55134 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdh12O55134 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC17.49■□□□□ 0.39
Pcdh12O55134 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdh12O55134 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdh12O55134 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdh12O55134 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdh12O55134 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Pcdh12O55134 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdh12O55134 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdh12O55134 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdh12O55134 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdh12O55134 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
Pcdh12O55134 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdh12O55134 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdh12O55134 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdh12O55134 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC17.48■□□□□ 0.39
Pcdh12O55134 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdh12O55134 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC17.48■□□□□ 0.39
Pcdh12O55134 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdh12O55134 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdh12O55134 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdh12O55134 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Pcdh12O55134 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdh12O55134 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC17.47■□□□□ 0.39
Pcdh12O55134 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdh12O55134 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms