Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Trdmt1O55055 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Trdmt1O55055 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Trdmt1O55055 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Trdmt1O55055 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Trdmt1O55055 Gm7860-201ENSMUST00000121190 879 ntBASIC21.5■■□□□ 1.03
Trdmt1O55055 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Trdmt1O55055 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Trdmt1O55055 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Trdmt1O55055 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
Trdmt1O55055 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Trdmt1O55055 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC21.49■■□□□ 1.03
Trdmt1O55055 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
Trdmt1O55055 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
Trdmt1O55055 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC21.49■■□□□ 1.03
Trdmt1O55055 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Trdmt1O55055 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC21.49■■□□□ 1.03
Trdmt1O55055 Gm20049-201ENSMUST00000219950 730 ntBASIC21.49■■□□□ 1.03
Trdmt1O55055 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Trdmt1O55055 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Trdmt1O55055 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Trdmt1O55055 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Trdmt1O55055 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Trdmt1O55055 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC21.49■■□□□ 1.03
Trdmt1O55055 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
Trdmt1O55055 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Trdmt1O55055 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Trdmt1O55055 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
Trdmt1O55055 Gm8520-201ENSMUST00000186517 868 ntBASIC21.48■■□□□ 1.03
Trdmt1O55055 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Trdmt1O55055 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Trdmt1O55055 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Trdmt1O55055 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Trdmt1O55055 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Trdmt1O55055 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Trdmt1O55055 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
Trdmt1O55055 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC21.47■■□□□ 1.03
Trdmt1O55055 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC21.47■■□□□ 1.03
Trdmt1O55055 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Trdmt1O55055 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Trdmt1O55055 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Trdmt1O55055 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC21.47■■□□□ 1.03
Trdmt1O55055 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Trdmt1O55055 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC21.47■■□□□ 1.03
Trdmt1O55055 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC21.47■■□□□ 1.03
Trdmt1O55055 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
Trdmt1O55055 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Trdmt1O55055 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
Trdmt1O55055 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Trdmt1O55055 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Trdmt1O55055 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Trdmt1O55055 AC152827.1-201ENSMUST00000221143 2189 ntBASIC21.46■■□□□ 1.03
Trdmt1O55055 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC21.46■■□□□ 1.03
Trdmt1O55055 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC21.46■■□□□ 1.03
Trdmt1O55055 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Trdmt1O55055 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Trdmt1O55055 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Trdmt1O55055 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Trdmt1O55055 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC21.46■■□□□ 1.03
Trdmt1O55055 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Trdmt1O55055 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Trdmt1O55055 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Trdmt1O55055 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.03
Trdmt1O55055 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Trdmt1O55055 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Trdmt1O55055 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
Trdmt1O55055 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Trdmt1O55055 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC21.45■■□□□ 1.02
Trdmt1O55055 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Trdmt1O55055 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Trdmt1O55055 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
Trdmt1O55055 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
Trdmt1O55055 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
Trdmt1O55055 AC122769.4-201ENSMUST00000228166 901 ntBASIC21.43■■□□□ 1.02
Trdmt1O55055 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Trdmt1O55055 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Trdmt1O55055 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
Trdmt1O55055 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Trdmt1O55055 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Trdmt1O55055 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC21.42■■□□□ 1.02
Trdmt1O55055 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC21.42■■□□□ 1.02
Trdmt1O55055 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Trdmt1O55055 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC21.42■■□□□ 1.02
Trdmt1O55055 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC21.42■■□□□ 1.02
Trdmt1O55055 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Trdmt1O55055 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Trdmt1O55055 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Trdmt1O55055 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC21.42■■□□□ 1.02
Trdmt1O55055 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC21.41■■□□□ 1.02
Trdmt1O55055 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Trdmt1O55055 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Trdmt1O55055 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Trdmt1O55055 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC21.41■■□□□ 1.02
Trdmt1O55055 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC21.41■■□□□ 1.02
Trdmt1O55055 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC21.41■■□□□ 1.02
Trdmt1O55055 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Trdmt1O55055 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
Trdmt1O55055 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Trdmt1O55055 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Trdmt1O55055 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms