Protein–RNA interactions for Protein: O35544

Slc1a6, Excitatory amino acid transporter 4, mousemouse

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc1a6O35544 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Slc1a6O35544 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC19.07■□□□□ 0.64
Slc1a6O35544 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC19.07■□□□□ 0.64
Slc1a6O35544 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Slc1a6O35544 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Slc1a6O35544 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Slc1a6O35544 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Slc1a6O35544 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Slc1a6O35544 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Slc1a6O35544 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Slc1a6O35544 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Slc1a6O35544 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC19.06■□□□□ 0.64
Slc1a6O35544 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC19.06■□□□□ 0.64
Slc1a6O35544 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC19.06■□□□□ 0.64
Slc1a6O35544 Gm27045-201ENSMUST00000182145 1402 ntBASIC19.06■□□□□ 0.64
Slc1a6O35544 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Slc1a6O35544 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Slc1a6O35544 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Slc1a6O35544 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Slc1a6O35544 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Slc1a6O35544 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Slc1a6O35544 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC19.05■□□□□ 0.64
Slc1a6O35544 Gm6627-201ENSMUST00000218299 2386 ntBASIC19.05■□□□□ 0.64
Slc1a6O35544 Gm6085-201ENSMUST00000182774 1470 ntBASIC19.05■□□□□ 0.64
Slc1a6O35544 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC19.05■□□□□ 0.64
Slc1a6O35544 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Slc1a6O35544 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
Slc1a6O35544 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Slc1a6O35544 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Slc1a6O35544 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Slc1a6O35544 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Slc1a6O35544 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
Slc1a6O35544 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Slc1a6O35544 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC19.04■□□□□ 0.64
Slc1a6O35544 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Slc1a6O35544 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Slc1a6O35544 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Slc1a6O35544 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Slc1a6O35544 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Slc1a6O35544 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Slc1a6O35544 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Slc1a6O35544 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Slc1a6O35544 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Slc1a6O35544 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Slc1a6O35544 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Slc1a6O35544 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Slc1a6O35544 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Slc1a6O35544 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC19.03■□□□□ 0.64
Slc1a6O35544 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Slc1a6O35544 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Slc1a6O35544 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Slc1a6O35544 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Slc1a6O35544 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Slc1a6O35544 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Slc1a6O35544 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Slc1a6O35544 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Slc1a6O35544 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Slc1a6O35544 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Slc1a6O35544 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC19.02■□□□□ 0.64
Slc1a6O35544 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Slc1a6O35544 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.64
Slc1a6O35544 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Slc1a6O35544 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Slc1a6O35544 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Slc1a6O35544 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Slc1a6O35544 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Slc1a6O35544 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
Slc1a6O35544 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Slc1a6O35544 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Slc1a6O35544 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Slc1a6O35544 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Slc1a6O35544 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Slc1a6O35544 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Slc1a6O35544 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Slc1a6O35544 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Slc1a6O35544 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC19■□□□□ 0.63
Slc1a6O35544 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Slc1a6O35544 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC19■□□□□ 0.63
Slc1a6O35544 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Slc1a6O35544 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Slc1a6O35544 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Slc1a6O35544 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Slc1a6O35544 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC19■□□□□ 0.63
Slc1a6O35544 AC154266.1-201ENSMUST00000223190 503 ntBASIC19■□□□□ 0.63
Slc1a6O35544 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Slc1a6O35544 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC19■□□□□ 0.63
Slc1a6O35544 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Slc1a6O35544 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC19■□□□□ 0.63
Slc1a6O35544 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Slc1a6O35544 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Slc1a6O35544 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Slc1a6O35544 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Slc1a6O35544 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Slc1a6O35544 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Slc1a6O35544 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC19■□□□□ 0.63
Slc1a6O35544 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Slc1a6O35544 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Slc1a6O35544 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Slc1a6O35544 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC18.99■□□□□ 0.63
Slc1a6O35544 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC18.99■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms