Protein–RNA interactions for Protein: O35491

Clk2, Dual specificity protein kinase CLK2, mousemouse

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk2O35491 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Clk2O35491 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Clk2O35491 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Clk2O35491 Gm29257-201ENSMUST00000186115 639 ntBASIC21.17■□□□□ 0.98
Clk2O35491 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC21.17■□□□□ 0.98
Clk2O35491 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
Clk2O35491 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC21.17■□□□□ 0.98
Clk2O35491 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Clk2O35491 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Clk2O35491 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC21.17■□□□□ 0.98
Clk2O35491 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Clk2O35491 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Clk2O35491 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Clk2O35491 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC21.16■□□□□ 0.98
Clk2O35491 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Clk2O35491 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Clk2O35491 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Clk2O35491 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Clk2O35491 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Clk2O35491 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Clk2O35491 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Clk2O35491 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Clk2O35491 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC21.15■□□□□ 0.98
Clk2O35491 Gm7514-201ENSMUST00000209475 934 ntBASIC21.15■□□□□ 0.98
Clk2O35491 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Clk2O35491 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Clk2O35491 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Clk2O35491 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Clk2O35491 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Clk2O35491 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC21.14■□□□□ 0.97
Clk2O35491 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC21.14■□□□□ 0.97
Clk2O35491 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Clk2O35491 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Clk2O35491 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Clk2O35491 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Clk2O35491 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Clk2O35491 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
Clk2O35491 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
Clk2O35491 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Clk2O35491 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC21.13■□□□□ 0.97
Clk2O35491 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Clk2O35491 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
Clk2O35491 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Clk2O35491 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Clk2O35491 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Clk2O35491 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC21.12■□□□□ 0.97
Clk2O35491 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Clk2O35491 Hsf1-207ENSMUST00000228371 2102 ntBASIC21.12■□□□□ 0.97
Clk2O35491 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Clk2O35491 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Clk2O35491 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC21.12■□□□□ 0.97
Clk2O35491 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC21.12■□□□□ 0.97
Clk2O35491 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Clk2O35491 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Clk2O35491 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
Clk2O35491 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC21.11■□□□□ 0.97
Clk2O35491 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Clk2O35491 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Clk2O35491 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
Clk2O35491 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Clk2O35491 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC21.11■□□□□ 0.97
Clk2O35491 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Clk2O35491 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Clk2O35491 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Clk2O35491 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Clk2O35491 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Clk2O35491 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Clk2O35491 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Clk2O35491 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Clk2O35491 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Clk2O35491 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Clk2O35491 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Clk2O35491 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC21.1■□□□□ 0.97
Clk2O35491 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
Clk2O35491 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Clk2O35491 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC21.09■□□□□ 0.97
Clk2O35491 Gm7860-201ENSMUST00000121190 879 ntBASIC21.09■□□□□ 0.97
Clk2O35491 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Clk2O35491 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Clk2O35491 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Clk2O35491 AC124392.1-201ENSMUST00000225172 5324 ntBASIC21.09■□□□□ 0.97
Clk2O35491 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Clk2O35491 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Clk2O35491 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Clk2O35491 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Clk2O35491 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Clk2O35491 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Clk2O35491 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Clk2O35491 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Clk2O35491 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
Clk2O35491 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC21.08■□□□□ 0.97
Clk2O35491 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Clk2O35491 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Clk2O35491 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Clk2O35491 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Clk2O35491 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Clk2O35491 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC21.07■□□□□ 0.96
Clk2O35491 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Clk2O35491 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC21.07■□□□□ 0.96
Clk2O35491 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 14.7 ms