Protein–RNA interactions for Protein: O35188

Cx3cl1, Fractalkine, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cl1O35188 AC137127.1-201ENSMUST00000213466 1078 ntBASIC18.16■□□□□ 0.5
Cx3cl1O35188 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cx3cl1O35188 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cx3cl1O35188 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cx3cl1O35188 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Cx3cl1O35188 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cx3cl1O35188 Iqck-206ENSMUST00000208658 2891 ntBASIC18.16■□□□□ 0.5
Cx3cl1O35188 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cx3cl1O35188 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cx3cl1O35188 Gm34220-201ENSMUST00000223001 2709 ntBASIC18.15■□□□□ 0.5
Cx3cl1O35188 Gm6802-201ENSMUST00000167843 1983 ntBASIC18.15■□□□□ 0.5
Cx3cl1O35188 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC18.15■□□□□ 0.5
Cx3cl1O35188 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Cx3cl1O35188 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Cx3cl1O35188 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cx3cl1O35188 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Cx3cl1O35188 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Cx3cl1O35188 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cx3cl1O35188 Gm10571-201ENSMUST00000097869 1638 ntBASIC18.15■□□□□ 0.5
Cx3cl1O35188 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Cx3cl1O35188 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC18.14■□□□□ 0.5
Cx3cl1O35188 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Cx3cl1O35188 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cx3cl1O35188 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cx3cl1O35188 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cx3cl1O35188 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cx3cl1O35188 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cx3cl1O35188 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cx3cl1O35188 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cx3cl1O35188 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cx3cl1O35188 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Cx3cl1O35188 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cx3cl1O35188 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cx3cl1O35188 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Cx3cl1O35188 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC18.13■□□□□ 0.49
Cx3cl1O35188 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cx3cl1O35188 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cx3cl1O35188 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cx3cl1O35188 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cx3cl1O35188 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cx3cl1O35188 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cx3cl1O35188 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cx3cl1O35188 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC18.12■□□□□ 0.49
Cx3cl1O35188 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Cx3cl1O35188 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cx3cl1O35188 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC18.12■□□□□ 0.49
Cx3cl1O35188 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Cx3cl1O35188 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC18.12■□□□□ 0.49
Cx3cl1O35188 AC154266.1-201ENSMUST00000223190 503 ntBASIC18.12■□□□□ 0.49
Cx3cl1O35188 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Cx3cl1O35188 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cx3cl1O35188 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cx3cl1O35188 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cx3cl1O35188 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cx3cl1O35188 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cx3cl1O35188 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cx3cl1O35188 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cx3cl1O35188 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Cx3cl1O35188 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Cx3cl1O35188 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cx3cl1O35188 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cx3cl1O35188 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC18.11■□□□□ 0.49
Cx3cl1O35188 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Cx3cl1O35188 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC18.11■□□□□ 0.49
Cx3cl1O35188 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cx3cl1O35188 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cx3cl1O35188 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cx3cl1O35188 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Cx3cl1O35188 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cx3cl1O35188 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Cx3cl1O35188 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cx3cl1O35188 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC18.1■□□□□ 0.49
Cx3cl1O35188 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC18.1■□□□□ 0.49
Cx3cl1O35188 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cx3cl1O35188 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cx3cl1O35188 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Cx3cl1O35188 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Cx3cl1O35188 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cx3cl1O35188 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Cx3cl1O35188 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cx3cl1O35188 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Cx3cl1O35188 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Cx3cl1O35188 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
Cx3cl1O35188 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cx3cl1O35188 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cx3cl1O35188 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Cx3cl1O35188 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cx3cl1O35188 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cx3cl1O35188 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Cx3cl1O35188 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
Cx3cl1O35188 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Cx3cl1O35188 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Cx3cl1O35188 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Cx3cl1O35188 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Cx3cl1O35188 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Cx3cl1O35188 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Cx3cl1O35188 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cx3cl1O35188 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC18.08■□□□□ 0.48
Cx3cl1O35188 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cx3cl1O35188 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 11.2 ms