Protein–RNA interactions for Protein: O35118

Gfra3, GDNF family receptor alpha-3, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gfra3O35118 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Gfra3O35118 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Gfra3O35118 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC16.73■□□□□ 0.27
Gfra3O35118 Gm9988-201ENSMUST00000069786 435 ntBASIC16.73■□□□□ 0.27
Gfra3O35118 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Gfra3O35118 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Gfra3O35118 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Gfra3O35118 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Gfra3O35118 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Gfra3O35118 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Gfra3O35118 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Gfra3O35118 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Gfra3O35118 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Gfra3O35118 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Gfra3O35118 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Gfra3O35118 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Gfra3O35118 Gm6802-201ENSMUST00000167843 1983 ntBASIC16.72■□□□□ 0.27
Gfra3O35118 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Gfra3O35118 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC16.72■□□□□ 0.27
Gfra3O35118 Gm14281-201ENSMUST00000121700 1294 ntBASIC16.72■□□□□ 0.27
Gfra3O35118 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC16.72■□□□□ 0.27
Gfra3O35118 Gm26571-201ENSMUST00000181399 666 ntBASIC16.72■□□□□ 0.27
Gfra3O35118 AC154266.1-201ENSMUST00000223190 503 ntBASIC16.72■□□□□ 0.27
Gfra3O35118 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Gfra3O35118 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
Gfra3O35118 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Gfra3O35118 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Gfra3O35118 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Gfra3O35118 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Gfra3O35118 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Gfra3O35118 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Gfra3O35118 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
Gfra3O35118 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Gfra3O35118 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Gfra3O35118 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Gfra3O35118 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Gfra3O35118 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC16.71■□□□□ 0.27
Gfra3O35118 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Gfra3O35118 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Gfra3O35118 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Gfra3O35118 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Gfra3O35118 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Gfra3O35118 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Gfra3O35118 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Gfra3O35118 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Gfra3O35118 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Gfra3O35118 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Gfra3O35118 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Gfra3O35118 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Gfra3O35118 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Gfra3O35118 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Gfra3O35118 Gm42778-201ENSMUST00000199644 553 ntBASIC16.7■□□□□ 0.26
Gfra3O35118 Gm42569-201ENSMUST00000200539 472 ntBASIC16.7■□□□□ 0.26
Gfra3O35118 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Gfra3O35118 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Gfra3O35118 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Gfra3O35118 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Gfra3O35118 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Gfra3O35118 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Gfra3O35118 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Gfra3O35118 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Gfra3O35118 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Gfra3O35118 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC16.69■□□□□ 0.26
Gfra3O35118 Gm18671-201ENSMUST00000214826 683 ntBASIC16.69■□□□□ 0.26
Gfra3O35118 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Gfra3O35118 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC16.69■□□□□ 0.26
Gfra3O35118 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Gfra3O35118 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Gfra3O35118 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Gfra3O35118 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC16.68■□□□□ 0.26
Gfra3O35118 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Gfra3O35118 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
Gfra3O35118 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Gfra3O35118 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Gfra3O35118 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Gfra3O35118 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Gfra3O35118 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Gfra3O35118 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Gfra3O35118 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Gfra3O35118 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Gfra3O35118 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Gfra3O35118 Gm10033-202ENSMUST00000211874 928 ntBASIC16.67■□□□□ 0.26
Gfra3O35118 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Gfra3O35118 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Gfra3O35118 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Gfra3O35118 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Gfra3O35118 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Gfra3O35118 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
Gfra3O35118 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Gfra3O35118 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC16.66■□□□□ 0.26
Gfra3O35118 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC16.66■□□□□ 0.26
Gfra3O35118 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC16.66■□□□□ 0.26
Gfra3O35118 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC16.66■□□□□ 0.26
Gfra3O35118 Reep4-203ENSMUST00000226563 1444 ntBASIC16.66■□□□□ 0.26
Gfra3O35118 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC16.66■□□□□ 0.26
Gfra3O35118 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Gfra3O35118 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Gfra3O35118 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC16.66■□□□□ 0.26
Gfra3O35118 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Gfra3O35118 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms