Protein–RNA interactions for Protein: O08785

Clock, Circadian locomoter output cycles protein kaput, mousemouse

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClockO08785 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ClockO08785 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ClockO08785 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
ClockO08785 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
ClockO08785 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ClockO08785 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
ClockO08785 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ClockO08785 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC18.34■□□□□ 0.53
ClockO08785 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
ClockO08785 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ClockO08785 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ClockO08785 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
ClockO08785 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC18.33■□□□□ 0.53
ClockO08785 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
ClockO08785 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
ClockO08785 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC18.33■□□□□ 0.53
ClockO08785 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
ClockO08785 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
ClockO08785 Gm7143-201ENSMUST00000222811 859 ntBASIC18.33■□□□□ 0.52
ClockO08785 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ClockO08785 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ClockO08785 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC18.33■□□□□ 0.52
ClockO08785 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ClockO08785 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
ClockO08785 AC122335.2-201ENSMUST00000213901 6181 ntBASIC18.33■□□□□ 0.52
ClockO08785 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC18.33■□□□□ 0.52
ClockO08785 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ClockO08785 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
ClockO08785 Gm38342-201ENSMUST00000195710 2980 ntBASIC18.32■□□□□ 0.52
ClockO08785 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
ClockO08785 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC18.32■□□□□ 0.52
ClockO08785 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
ClockO08785 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
ClockO08785 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ClockO08785 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
ClockO08785 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ClockO08785 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ClockO08785 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
ClockO08785 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ClockO08785 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
ClockO08785 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ClockO08785 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
ClockO08785 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ClockO08785 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ClockO08785 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ClockO08785 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
ClockO08785 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC18.31■□□□□ 0.52
ClockO08785 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
ClockO08785 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ClockO08785 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
ClockO08785 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ClockO08785 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC18.31■□□□□ 0.52
ClockO08785 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
ClockO08785 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ClockO08785 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ClockO08785 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ClockO08785 Rarb-207ENSMUST00000225921 2756 ntBASIC18.3■□□□□ 0.52
ClockO08785 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
ClockO08785 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ClockO08785 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
ClockO08785 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ClockO08785 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ClockO08785 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
ClockO08785 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
ClockO08785 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ClockO08785 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
ClockO08785 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
ClockO08785 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ClockO08785 Mir6236-201ENSMUST00000184437 123 ntBASIC18.3■□□□□ 0.52
ClockO08785 Gm10399-202ENSMUST00000202768 748 ntBASIC18.3■□□□□ 0.52
ClockO08785 Gm5921-201ENSMUST00000075898 882 ntBASIC18.3■□□□□ 0.52
ClockO08785 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
ClockO08785 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
ClockO08785 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC18.3■□□□□ 0.52
ClockO08785 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
ClockO08785 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC18.3■□□□□ 0.52
ClockO08785 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
ClockO08785 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
ClockO08785 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ClockO08785 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ClockO08785 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ClockO08785 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC18.29■□□□□ 0.52
ClockO08785 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
ClockO08785 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ClockO08785 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
ClockO08785 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
ClockO08785 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC18.29■□□□□ 0.52
ClockO08785 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ClockO08785 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
ClockO08785 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
ClockO08785 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ClockO08785 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
ClockO08785 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
ClockO08785 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ClockO08785 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
ClockO08785 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
ClockO08785 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
ClockO08785 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ClockO08785 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
ClockO08785 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 55.7 ms