Protein–RNA interactions for Protein: O08641

Sh3yl1, SH3 domain-containing YSC84-like protein 1, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3yl1O08641 Gm37035-201ENSMUST00000194809 2148 ntBASIC18.41■□□□□ 0.54
Sh3yl1O08641 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Sh3yl1O08641 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sh3yl1O08641 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Sh3yl1O08641 Gm2011-201ENSMUST00000203124 1263 ntBASIC18.41■□□□□ 0.54
Sh3yl1O08641 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sh3yl1O08641 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC18.41■□□□□ 0.54
Sh3yl1O08641 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Sh3yl1O08641 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sh3yl1O08641 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC18.4■□□□□ 0.54
Sh3yl1O08641 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sh3yl1O08641 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Sh3yl1O08641 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Sh3yl1O08641 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Sh3yl1O08641 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sh3yl1O08641 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC18.4■□□□□ 0.54
Sh3yl1O08641 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sh3yl1O08641 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Sh3yl1O08641 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.54
Sh3yl1O08641 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Sh3yl1O08641 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sh3yl1O08641 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sh3yl1O08641 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sh3yl1O08641 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC18.39■□□□□ 0.53
Sh3yl1O08641 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sh3yl1O08641 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC18.39■□□□□ 0.53
Sh3yl1O08641 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sh3yl1O08641 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sh3yl1O08641 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sh3yl1O08641 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sh3yl1O08641 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC18.39■□□□□ 0.53
Sh3yl1O08641 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sh3yl1O08641 Gm43182-201ENSMUST00000199476 2528 ntBASIC18.38■□□□□ 0.53
Sh3yl1O08641 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sh3yl1O08641 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Sh3yl1O08641 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sh3yl1O08641 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Sh3yl1O08641 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC18.38■□□□□ 0.53
Sh3yl1O08641 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC18.38■□□□□ 0.53
Sh3yl1O08641 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sh3yl1O08641 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sh3yl1O08641 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC18.38■□□□□ 0.53
Sh3yl1O08641 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Sh3yl1O08641 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sh3yl1O08641 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sh3yl1O08641 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Sh3yl1O08641 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sh3yl1O08641 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sh3yl1O08641 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sh3yl1O08641 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sh3yl1O08641 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Sh3yl1O08641 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC18.36■□□□□ 0.53
Sh3yl1O08641 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Sh3yl1O08641 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Sh3yl1O08641 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC18.36■□□□□ 0.53
Sh3yl1O08641 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sh3yl1O08641 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sh3yl1O08641 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sh3yl1O08641 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sh3yl1O08641 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sh3yl1O08641 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Sh3yl1O08641 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
Sh3yl1O08641 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sh3yl1O08641 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Sh3yl1O08641 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC18.35■□□□□ 0.53
Sh3yl1O08641 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sh3yl1O08641 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
Sh3yl1O08641 Gm21168-201ENSMUST00000199646 1096 ntBASIC18.35■□□□□ 0.53
Sh3yl1O08641 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Sh3yl1O08641 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sh3yl1O08641 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC18.35■□□□□ 0.53
Sh3yl1O08641 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sh3yl1O08641 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC18.35■□□□□ 0.53
Sh3yl1O08641 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Sh3yl1O08641 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Sh3yl1O08641 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sh3yl1O08641 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sh3yl1O08641 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sh3yl1O08641 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sh3yl1O08641 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sh3yl1O08641 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sh3yl1O08641 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sh3yl1O08641 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC18.34■□□□□ 0.53
Sh3yl1O08641 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Sh3yl1O08641 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Sh3yl1O08641 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sh3yl1O08641 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Sh3yl1O08641 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC18.34■□□□□ 0.53
Sh3yl1O08641 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.53
Sh3yl1O08641 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Sh3yl1O08641 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Sh3yl1O08641 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC18.33■□□□□ 0.53
Sh3yl1O08641 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC18.33■□□□□ 0.53
Sh3yl1O08641 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Sh3yl1O08641 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Sh3yl1O08641 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Sh3yl1O08641 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Sh3yl1O08641 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Sh3yl1O08641 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Sh3yl1O08641 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms