Protein–RNA interactions for Protein: J3QPF1

Gm10553, Predicted gene 10553, mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm10553J3QPF1 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Gm10553J3QPF1 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Gm10553J3QPF1 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Gm10553J3QPF1 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Gm10553J3QPF1 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Gm10553J3QPF1 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Gm10553J3QPF1 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC14.8□□□□□ -0.04
Gm10553J3QPF1 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Gm10553J3QPF1 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Gm10553J3QPF1 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC14.8□□□□□ -0.04
Gm10553J3QPF1 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Gm10553J3QPF1 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Gm10553J3QPF1 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC14.8□□□□□ -0.04
Gm10553J3QPF1 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Gm10553J3QPF1 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC14.8□□□□□ -0.04
Gm10553J3QPF1 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Gm10553J3QPF1 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Gm10553J3QPF1 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Gm10553J3QPF1 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC14.79□□□□□ -0.04
Gm10553J3QPF1 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Gm10553J3QPF1 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC14.79□□□□□ -0.04
Gm10553J3QPF1 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Gm10553J3QPF1 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Gm10553J3QPF1 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Gm10553J3QPF1 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Gm10553J3QPF1 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Gm10553J3QPF1 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Gm10553J3QPF1 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Gm10553J3QPF1 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Gm10553J3QPF1 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Gm10553J3QPF1 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Gm10553J3QPF1 Gm20100-201ENSMUST00000209418 2272 ntBASIC14.78□□□□□ -0.04
Gm10553J3QPF1 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Gm10553J3QPF1 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Gm10553J3QPF1 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC14.78□□□□□ -0.04
Gm10553J3QPF1 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Gm10553J3QPF1 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
Gm10553J3QPF1 AC154266.1-201ENSMUST00000223190 503 ntBASIC14.78□□□□□ -0.04
Gm10553J3QPF1 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Gm10553J3QPF1 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Gm10553J3QPF1 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Gm10553J3QPF1 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Gm10553J3QPF1 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Gm10553J3QPF1 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Gm10553J3QPF1 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC14.77□□□□□ -0.04
Gm10553J3QPF1 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.04
Gm10553J3QPF1 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Gm10553J3QPF1 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Gm10553J3QPF1 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
Gm10553J3QPF1 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
Gm10553J3QPF1 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Gm10553J3QPF1 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Gm10553J3QPF1 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Gm10553J3QPF1 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Gm10553J3QPF1 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Gm10553J3QPF1 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Gm10553J3QPF1 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Gm10553J3QPF1 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Gm10553J3QPF1 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Gm10553J3QPF1 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC14.76□□□□□ -0.05
Gm10553J3QPF1 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Gm10553J3QPF1 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC14.76□□□□□ -0.05
Gm10553J3QPF1 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Gm10553J3QPF1 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Gm10553J3QPF1 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Gm10553J3QPF1 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC14.76□□□□□ -0.05
Gm10553J3QPF1 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Gm10553J3QPF1 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Gm10553J3QPF1 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Gm10553J3QPF1 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Gm10553J3QPF1 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Gm10553J3QPF1 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Gm10553J3QPF1 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Gm10553J3QPF1 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC14.76□□□□□ -0.05
Gm10553J3QPF1 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Gm10553J3QPF1 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Gm10553J3QPF1 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Gm10553J3QPF1 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Gm10553J3QPF1 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC14.75□□□□□ -0.05
Gm10553J3QPF1 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC14.75□□□□□ -0.05
Gm10553J3QPF1 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Gm10553J3QPF1 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Gm10553J3QPF1 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Gm10553J3QPF1 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Gm10553J3QPF1 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Gm10553J3QPF1 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Gm10553J3QPF1 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Gm10553J3QPF1 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC14.74□□□□□ -0.05
Gm10553J3QPF1 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Gm10553J3QPF1 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Gm10553J3QPF1 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Gm10553J3QPF1 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Gm10553J3QPF1 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC14.74□□□□□ -0.05
Gm10553J3QPF1 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC14.74□□□□□ -0.05
Gm10553J3QPF1 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Gm10553J3QPF1 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Gm10553J3QPF1 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Gm10553J3QPF1 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Gm10553J3QPF1 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Gm10553J3QPF1 Gm34220-201ENSMUST00000223001 2709 ntBASIC14.74□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms