Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC35.73■■■■□ 3.31
Ccdc180J3QNE4 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC35.73■■■■□ 3.31
Ccdc180J3QNE4 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC35.73■■■■□ 3.31
Ccdc180J3QNE4 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC35.73■■■■□ 3.31
Ccdc180J3QNE4 Rab3c-203ENSMUST00000224180 967 ntBASIC35.73■■■■□ 3.31
Ccdc180J3QNE4 AC135637.1-201ENSMUST00000227750 365 ntBASIC35.73■■■■□ 3.31
Ccdc180J3QNE4 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC35.73■■■■□ 3.31
Ccdc180J3QNE4 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC35.73■■■■□ 3.31
Ccdc180J3QNE4 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC35.73■■■■□ 3.31
Ccdc180J3QNE4 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC35.73■■■■□ 3.31
Ccdc180J3QNE4 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC35.73■■■■□ 3.31
Ccdc180J3QNE4 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC35.72■■■■□ 3.31
Ccdc180J3QNE4 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC35.72■■■■□ 3.31
Ccdc180J3QNE4 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC35.72■■■■□ 3.31
Ccdc180J3QNE4 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC35.72■■■■□ 3.31
Ccdc180J3QNE4 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC35.72■■■■□ 3.31
Ccdc180J3QNE4 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC35.72■■■■□ 3.31
Ccdc180J3QNE4 Trmt13-210ENSMUST00000198454 880 ntBASIC35.72■■■■□ 3.31
Ccdc180J3QNE4 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC35.72■■■■□ 3.31
Ccdc180J3QNE4 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC35.71■■■■□ 3.31
Ccdc180J3QNE4 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC35.71■■■■□ 3.31
Ccdc180J3QNE4 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC35.71■■■■□ 3.31
Ccdc180J3QNE4 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC35.71■■■■□ 3.31
Ccdc180J3QNE4 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC35.71■■■■□ 3.31
Ccdc180J3QNE4 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC35.71■■■■□ 3.31
Ccdc180J3QNE4 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC35.71■■■■□ 3.31
Ccdc180J3QNE4 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC35.7■■■■□ 3.31
Ccdc180J3QNE4 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC35.7■■■■□ 3.31
Ccdc180J3QNE4 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC35.7■■■■□ 3.31
Ccdc180J3QNE4 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC35.7■■■■□ 3.31
Ccdc180J3QNE4 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC35.7■■■■□ 3.31
Ccdc180J3QNE4 Gm22240-201ENSMUST00000175225 82 ntBASIC35.7■■■■□ 3.31
Ccdc180J3QNE4 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC35.7■■■■□ 3.31
Ccdc180J3QNE4 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC35.7■■■■□ 3.31
Ccdc180J3QNE4 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC35.7■■■■□ 3.31
Ccdc180J3QNE4 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC35.7■■■■□ 3.31
Ccdc180J3QNE4 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC35.7■■■■□ 3.31
Ccdc180J3QNE4 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC35.69■■■■□ 3.3
Ccdc180J3QNE4 Gm10252-201ENSMUST00000209541 832 ntBASIC35.69■■■■□ 3.3
Ccdc180J3QNE4 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC35.69■■■■□ 3.3
Ccdc180J3QNE4 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC35.69■■■■□ 3.3
Ccdc180J3QNE4 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC35.68■■■■□ 3.3
Ccdc180J3QNE4 Gm44878-201ENSMUST00000205812 1295 ntBASIC35.68■■■■□ 3.3
Ccdc180J3QNE4 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC35.68■■■■□ 3.3
Ccdc180J3QNE4 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC35.68■■■■□ 3.3
Ccdc180J3QNE4 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC35.68■■■■□ 3.3
Ccdc180J3QNE4 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC35.68■■■■□ 3.3
Ccdc180J3QNE4 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC35.68■■■■□ 3.3
Ccdc180J3QNE4 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC35.67■■■■□ 3.3
Ccdc180J3QNE4 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC35.67■■■■□ 3.3
Ccdc180J3QNE4 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC35.67■■■■□ 3.3
Ccdc180J3QNE4 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC35.67■■■■□ 3.3
Ccdc180J3QNE4 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC35.67■■■■□ 3.3
Ccdc180J3QNE4 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC35.67■■■■□ 3.3
Ccdc180J3QNE4 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC35.67■■■■□ 3.3
Ccdc180J3QNE4 AC131586.2-201ENSMUST00000228370 1512 ntBASIC35.66■■■■□ 3.3
Ccdc180J3QNE4 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC35.66■■■■□ 3.3
Ccdc180J3QNE4 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC35.66■■■■□ 3.3
Ccdc180J3QNE4 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC35.66■■■■□ 3.3
Ccdc180J3QNE4 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC35.65■■■■□ 3.3
Ccdc180J3QNE4 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC35.65■■■■□ 3.3
Ccdc180J3QNE4 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC35.65■■■■□ 3.3
Ccdc180J3QNE4 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC35.65■■■■□ 3.3
Ccdc180J3QNE4 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC35.65■■■■□ 3.3
Ccdc180J3QNE4 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC35.65■■■■□ 3.3
Ccdc180J3QNE4 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC35.65■■■■□ 3.3
Ccdc180J3QNE4 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC35.64■■■■□ 3.3
Ccdc180J3QNE4 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC35.64■■■■□ 3.3
Ccdc180J3QNE4 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC35.64■■■■□ 3.3
Ccdc180J3QNE4 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC35.64■■■■□ 3.3
Ccdc180J3QNE4 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC35.64■■■■□ 3.3
Ccdc180J3QNE4 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC35.63■■■■□ 3.29
Ccdc180J3QNE4 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC35.63■■■■□ 3.29
Ccdc180J3QNE4 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC35.63■■■■□ 3.29
Ccdc180J3QNE4 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC35.63■■■■□ 3.29
Ccdc180J3QNE4 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC35.62■■■■□ 3.29
Ccdc180J3QNE4 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC35.62■■■■□ 3.29
Ccdc180J3QNE4 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC35.62■■■■□ 3.29
Ccdc180J3QNE4 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC35.62■■■■□ 3.29
Ccdc180J3QNE4 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC35.62■■■■□ 3.29
Ccdc180J3QNE4 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC35.62■■■■□ 3.29
Ccdc180J3QNE4 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC35.62■■■■□ 3.29
Ccdc180J3QNE4 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC35.62■■■■□ 3.29
Ccdc180J3QNE4 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC35.62■■■■□ 3.29
Ccdc180J3QNE4 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC35.62■■■■□ 3.29
Ccdc180J3QNE4 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC35.61■■■■□ 3.29
Ccdc180J3QNE4 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC35.61■■■■□ 3.29
Ccdc180J3QNE4 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC35.61■■■■□ 3.29
Ccdc180J3QNE4 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC35.61■■■■□ 3.29
Ccdc180J3QNE4 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC35.61■■■■□ 3.29
Ccdc180J3QNE4 Gm37563-201ENSMUST00000192580 1513 ntBASIC35.61■■■■□ 3.29
Ccdc180J3QNE4 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC35.61■■■■□ 3.29
Ccdc180J3QNE4 Hsf1-207ENSMUST00000228371 2102 ntBASIC35.61■■■■□ 3.29
Ccdc180J3QNE4 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC35.61■■■■□ 3.29
Ccdc180J3QNE4 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC35.6■■■■□ 3.29
Ccdc180J3QNE4 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC35.6■■■■□ 3.29
Ccdc180J3QNE4 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC35.6■■■■□ 3.29
Ccdc180J3QNE4 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC35.59■■■■□ 3.29
Ccdc180J3QNE4 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC35.59■■■■□ 3.29
Ccdc180J3QNE4 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC35.59■■■■□ 3.29
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms