Protein–RNA interactions for Protein: E9PXF0

Pcdh17, Protocadherin 17, mousemouse

Predictions only

Length 1,157 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh17E9PXF0 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdh17E9PXF0 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC18■□□□□ 0.47
Pcdh17E9PXF0 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
Pcdh17E9PXF0 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC18■□□□□ 0.47
Pcdh17E9PXF0 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdh17E9PXF0 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdh17E9PXF0 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdh17E9PXF0 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdh17E9PXF0 Reep4-203ENSMUST00000226563 1444 ntBASIC17.99■□□□□ 0.47
Pcdh17E9PXF0 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdh17E9PXF0 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdh17E9PXF0 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdh17E9PXF0 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Pcdh17E9PXF0 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdh17E9PXF0 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdh17E9PXF0 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdh17E9PXF0 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdh17E9PXF0 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdh17E9PXF0 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Pcdh17E9PXF0 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Pcdh17E9PXF0 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdh17E9PXF0 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Pcdh17E9PXF0 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC17.98■□□□□ 0.47
Pcdh17E9PXF0 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdh17E9PXF0 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdh17E9PXF0 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdh17E9PXF0 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdh17E9PXF0 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdh17E9PXF0 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC17.98■□□□□ 0.47
Pcdh17E9PXF0 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Pcdh17E9PXF0 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdh17E9PXF0 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdh17E9PXF0 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdh17E9PXF0 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC17.97■□□□□ 0.47
Pcdh17E9PXF0 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdh17E9PXF0 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdh17E9PXF0 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC17.97■□□□□ 0.47
Pcdh17E9PXF0 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdh17E9PXF0 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdh17E9PXF0 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdh17E9PXF0 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdh17E9PXF0 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdh17E9PXF0 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC17.96■□□□□ 0.47
Pcdh17E9PXF0 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC17.96■□□□□ 0.47
Pcdh17E9PXF0 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC17.96■□□□□ 0.47
Pcdh17E9PXF0 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdh17E9PXF0 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdh17E9PXF0 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Pcdh17E9PXF0 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdh17E9PXF0 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdh17E9PXF0 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdh17E9PXF0 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdh17E9PXF0 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Pcdh17E9PXF0 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdh17E9PXF0 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
Pcdh17E9PXF0 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdh17E9PXF0 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdh17E9PXF0 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdh17E9PXF0 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdh17E9PXF0 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdh17E9PXF0 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdh17E9PXF0 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdh17E9PXF0 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdh17E9PXF0 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdh17E9PXF0 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdh17E9PXF0 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdh17E9PXF0 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdh17E9PXF0 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdh17E9PXF0 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC17.94■□□□□ 0.46
Pcdh17E9PXF0 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC17.94■□□□□ 0.46
Pcdh17E9PXF0 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Pcdh17E9PXF0 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdh17E9PXF0 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Pcdh17E9PXF0 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdh17E9PXF0 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdh17E9PXF0 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdh17E9PXF0 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdh17E9PXF0 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdh17E9PXF0 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdh17E9PXF0 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdh17E9PXF0 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC17.93■□□□□ 0.46
Pcdh17E9PXF0 Spcs1-207ENSMUST00000228767 1008 ntBASIC17.93■□□□□ 0.46
Pcdh17E9PXF0 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdh17E9PXF0 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdh17E9PXF0 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdh17E9PXF0 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdh17E9PXF0 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdh17E9PXF0 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Pcdh17E9PXF0 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdh17E9PXF0 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdh17E9PXF0 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdh17E9PXF0 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdh17E9PXF0 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC17.92■□□□□ 0.46
Pcdh17E9PXF0 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdh17E9PXF0 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Pcdh17E9PXF0 Golph3-202ENSMUST00000226517 2359 ntBASIC17.92■□□□□ 0.46
Pcdh17E9PXF0 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Pcdh17E9PXF0 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdh17E9PXF0 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdh17E9PXF0 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC17.92■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms