Protein–RNA interactions for Protein: E9PX29

Sptbn4, Spectrin beta chain, mousemouse

Predictions only

Length 2,561 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sptbn4E9PX29 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sptbn4E9PX29 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
Sptbn4E9PX29 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sptbn4E9PX29 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sptbn4E9PX29 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sptbn4E9PX29 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Sptbn4E9PX29 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Sptbn4E9PX29 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sptbn4E9PX29 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
Sptbn4E9PX29 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC17.7■□□□□ 0.42
Sptbn4E9PX29 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sptbn4E9PX29 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sptbn4E9PX29 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sptbn4E9PX29 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC17.69■□□□□ 0.42
Sptbn4E9PX29 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sptbn4E9PX29 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sptbn4E9PX29 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Sptbn4E9PX29 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sptbn4E9PX29 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sptbn4E9PX29 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC17.68■□□□□ 0.42
Sptbn4E9PX29 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC17.68■□□□□ 0.42
Sptbn4E9PX29 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sptbn4E9PX29 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sptbn4E9PX29 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sptbn4E9PX29 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sptbn4E9PX29 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sptbn4E9PX29 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC17.68■□□□□ 0.42
Sptbn4E9PX29 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Sptbn4E9PX29 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Sptbn4E9PX29 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sptbn4E9PX29 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sptbn4E9PX29 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sptbn4E9PX29 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Sptbn4E9PX29 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sptbn4E9PX29 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC17.67■□□□□ 0.42
Sptbn4E9PX29 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC17.67■□□□□ 0.42
Sptbn4E9PX29 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sptbn4E9PX29 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Sptbn4E9PX29 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Sptbn4E9PX29 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC17.67■□□□□ 0.42
Sptbn4E9PX29 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
Sptbn4E9PX29 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Sptbn4E9PX29 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sptbn4E9PX29 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sptbn4E9PX29 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC17.66■□□□□ 0.42
Sptbn4E9PX29 AC159205.3-201ENSMUST00000224614 874 ntBASIC17.66■□□□□ 0.42
Sptbn4E9PX29 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sptbn4E9PX29 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sptbn4E9PX29 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Sptbn4E9PX29 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Sptbn4E9PX29 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
Sptbn4E9PX29 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Sptbn4E9PX29 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sptbn4E9PX29 Gm21596-201ENSMUST00000178049 1316 ntBASIC17.65■□□□□ 0.42
Sptbn4E9PX29 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sptbn4E9PX29 Gm18666-201ENSMUST00000190039 958 ntBASIC17.65■□□□□ 0.42
Sptbn4E9PX29 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sptbn4E9PX29 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sptbn4E9PX29 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC17.65■□□□□ 0.42
Sptbn4E9PX29 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC17.65■□□□□ 0.42
Sptbn4E9PX29 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Sptbn4E9PX29 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Sptbn4E9PX29 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
Sptbn4E9PX29 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sptbn4E9PX29 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sptbn4E9PX29 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC17.65■□□□□ 0.42
Sptbn4E9PX29 Gm42418-201ENSMUST00000182010 1831 ntBASIC17.65■□□□□ 0.42
Sptbn4E9PX29 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sptbn4E9PX29 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Sptbn4E9PX29 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sptbn4E9PX29 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Sptbn4E9PX29 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Sptbn4E9PX29 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sptbn4E9PX29 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sptbn4E9PX29 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Sptbn4E9PX29 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC17.63■□□□□ 0.41
Sptbn4E9PX29 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sptbn4E9PX29 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
Sptbn4E9PX29 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Sptbn4E9PX29 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sptbn4E9PX29 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sptbn4E9PX29 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sptbn4E9PX29 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC17.63■□□□□ 0.41
Sptbn4E9PX29 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Sptbn4E9PX29 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Sptbn4E9PX29 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sptbn4E9PX29 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sptbn4E9PX29 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sptbn4E9PX29 AC131586.2-201ENSMUST00000228370 1512 ntBASIC17.62■□□□□ 0.41
Sptbn4E9PX29 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC17.62■□□□□ 0.41
Sptbn4E9PX29 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sptbn4E9PX29 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Sptbn4E9PX29 Gm5867-201ENSMUST00000063197 592 ntBASIC17.62■□□□□ 0.41
Sptbn4E9PX29 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC17.62■□□□□ 0.41
Sptbn4E9PX29 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sptbn4E9PX29 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
Sptbn4E9PX29 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sptbn4E9PX29 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Sptbn4E9PX29 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sptbn4E9PX29 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms