Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Col6a3E9PWQ3 Gm18666-201ENSMUST00000190039 958 ntBASIC19.8■□□□□ 0.76
Col6a3E9PWQ3 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Col6a3E9PWQ3 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Col6a3E9PWQ3 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Col6a3E9PWQ3 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
Col6a3E9PWQ3 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC19.8■□□□□ 0.76
Col6a3E9PWQ3 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Col6a3E9PWQ3 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Col6a3E9PWQ3 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC19.79■□□□□ 0.76
Col6a3E9PWQ3 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
Col6a3E9PWQ3 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Col6a3E9PWQ3 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Col6a3E9PWQ3 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Col6a3E9PWQ3 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC19.78■□□□□ 0.76
Col6a3E9PWQ3 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Col6a3E9PWQ3 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Col6a3E9PWQ3 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC19.78■□□□□ 0.76
Col6a3E9PWQ3 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Col6a3E9PWQ3 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Col6a3E9PWQ3 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Col6a3E9PWQ3 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Col6a3E9PWQ3 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Col6a3E9PWQ3 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Col6a3E9PWQ3 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Col6a3E9PWQ3 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
Col6a3E9PWQ3 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Col6a3E9PWQ3 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Col6a3E9PWQ3 Gm7889-201ENSMUST00000185591 958 ntBASIC19.77■□□□□ 0.76
Col6a3E9PWQ3 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.75
Col6a3E9PWQ3 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Col6a3E9PWQ3 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Col6a3E9PWQ3 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Col6a3E9PWQ3 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Col6a3E9PWQ3 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Col6a3E9PWQ3 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Col6a3E9PWQ3 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Col6a3E9PWQ3 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Col6a3E9PWQ3 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Col6a3E9PWQ3 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Col6a3E9PWQ3 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Col6a3E9PWQ3 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Col6a3E9PWQ3 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Col6a3E9PWQ3 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Col6a3E9PWQ3 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Col6a3E9PWQ3 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Col6a3E9PWQ3 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Col6a3E9PWQ3 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Col6a3E9PWQ3 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC19.75■□□□□ 0.75
Col6a3E9PWQ3 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Col6a3E9PWQ3 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC19.75■□□□□ 0.75
Col6a3E9PWQ3 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Col6a3E9PWQ3 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Col6a3E9PWQ3 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Col6a3E9PWQ3 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Col6a3E9PWQ3 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC19.74■□□□□ 0.75
Col6a3E9PWQ3 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Col6a3E9PWQ3 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Col6a3E9PWQ3 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Col6a3E9PWQ3 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Col6a3E9PWQ3 Gm10013-201ENSMUST00000106074 672 ntBASIC19.74■□□□□ 0.75
Col6a3E9PWQ3 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC19.74■□□□□ 0.75
Col6a3E9PWQ3 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Col6a3E9PWQ3 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Col6a3E9PWQ3 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC19.73■□□□□ 0.75
Col6a3E9PWQ3 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Col6a3E9PWQ3 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Col6a3E9PWQ3 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Col6a3E9PWQ3 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Col6a3E9PWQ3 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Col6a3E9PWQ3 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Col6a3E9PWQ3 Gm13509-201ENSMUST00000119733 1308 ntBASIC19.73■□□□□ 0.75
Col6a3E9PWQ3 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Col6a3E9PWQ3 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Col6a3E9PWQ3 AA414768-201ENSMUST00000121924 1257 ntBASIC19.73■□□□□ 0.75
Col6a3E9PWQ3 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Col6a3E9PWQ3 AC154471.1-201ENSMUST00000224418 436 ntBASIC19.73■□□□□ 0.75
Col6a3E9PWQ3 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Col6a3E9PWQ3 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC19.73■□□□□ 0.75
Col6a3E9PWQ3 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Col6a3E9PWQ3 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Col6a3E9PWQ3 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Col6a3E9PWQ3 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Col6a3E9PWQ3 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Col6a3E9PWQ3 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Col6a3E9PWQ3 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC19.72■□□□□ 0.75
Col6a3E9PWQ3 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC19.72■□□□□ 0.75
Col6a3E9PWQ3 Gm11539-201ENSMUST00000119837 557 ntBASIC19.72■□□□□ 0.75
Col6a3E9PWQ3 Gm13436-201ENSMUST00000120418 567 ntBASIC19.72■□□□□ 0.75
Col6a3E9PWQ3 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Col6a3E9PWQ3 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Col6a3E9PWQ3 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Col6a3E9PWQ3 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Col6a3E9PWQ3 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Col6a3E9PWQ3 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Col6a3E9PWQ3 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Col6a3E9PWQ3 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Col6a3E9PWQ3 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Col6a3E9PWQ3 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Col6a3E9PWQ3 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms