Protein–RNA interactions for Protein: D3Z235

Gm3543, Predicted gene 3543, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3543D3Z235 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Gm3543D3Z235 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Gm3543D3Z235 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Gm3543D3Z235 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC17.47■□□□□ 0.39
Gm3543D3Z235 Gm8495-201ENSMUST00000188740 694 ntBASIC17.47■□□□□ 0.39
Gm3543D3Z235 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Gm3543D3Z235 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Gm3543D3Z235 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Gm3543D3Z235 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC17.47■□□□□ 0.39
Gm3543D3Z235 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Gm3543D3Z235 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Gm3543D3Z235 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Gm3543D3Z235 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Gm3543D3Z235 Smad6-203ENSMUST00000179458 273 ntBASIC17.46■□□□□ 0.39
Gm3543D3Z235 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC17.46■□□□□ 0.39
Gm3543D3Z235 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Gm3543D3Z235 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Gm3543D3Z235 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Gm3543D3Z235 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC17.46■□□□□ 0.38
Gm3543D3Z235 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Gm3543D3Z235 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Gm3543D3Z235 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
Gm3543D3Z235 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC17.45■□□□□ 0.38
Gm3543D3Z235 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Gm3543D3Z235 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Gm3543D3Z235 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Gm3543D3Z235 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Gm3543D3Z235 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Gm3543D3Z235 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Gm3543D3Z235 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC17.45■□□□□ 0.38
Gm3543D3Z235 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Gm3543D3Z235 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC17.45■□□□□ 0.38
Gm3543D3Z235 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC17.45■□□□□ 0.38
Gm3543D3Z235 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Gm3543D3Z235 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC17.45■□□□□ 0.38
Gm3543D3Z235 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Gm3543D3Z235 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Gm3543D3Z235 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Gm3543D3Z235 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Gm3543D3Z235 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC17.45■□□□□ 0.38
Gm3543D3Z235 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Gm3543D3Z235 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Gm3543D3Z235 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Gm3543D3Z235 Gm43909-201ENSMUST00000203443 1876 ntBASIC17.44■□□□□ 0.38
Gm3543D3Z235 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Gm3543D3Z235 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Gm3543D3Z235 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC17.44■□□□□ 0.38
Gm3543D3Z235 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Gm3543D3Z235 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Gm3543D3Z235 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Gm3543D3Z235 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Gm3543D3Z235 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Gm3543D3Z235 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Gm3543D3Z235 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Gm3543D3Z235 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Gm3543D3Z235 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Gm3543D3Z235 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC17.43■□□□□ 0.38
Gm3543D3Z235 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Gm3543D3Z235 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC17.43■□□□□ 0.38
Gm3543D3Z235 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Gm3543D3Z235 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Gm3543D3Z235 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Gm3543D3Z235 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Gm3543D3Z235 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Gm3543D3Z235 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Gm3543D3Z235 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Gm3543D3Z235 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Gm3543D3Z235 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Gm3543D3Z235 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Gm3543D3Z235 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Gm3543D3Z235 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Gm3543D3Z235 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Gm3543D3Z235 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Gm3543D3Z235 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Gm3543D3Z235 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Gm3543D3Z235 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Gm3543D3Z235 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Gm3543D3Z235 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Gm3543D3Z235 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Gm3543D3Z235 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Gm3543D3Z235 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Gm3543D3Z235 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Gm3543D3Z235 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Gm3543D3Z235 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC17.4■□□□□ 0.38
Gm3543D3Z235 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Gm3543D3Z235 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Gm3543D3Z235 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Gm3543D3Z235 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC17.4■□□□□ 0.38
Gm3543D3Z235 Gm11421-201ENSMUST00000122124 294 ntBASIC17.4■□□□□ 0.38
Gm3543D3Z235 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Gm3543D3Z235 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Gm3543D3Z235 AC165080.2-201ENSMUST00000217491 1530 ntBASIC17.4■□□□□ 0.38
Gm3543D3Z235 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Gm3543D3Z235 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Gm3543D3Z235 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Gm3543D3Z235 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.38
Gm3543D3Z235 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC17.39■□□□□ 0.38
Gm3543D3Z235 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Gm3543D3Z235 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Gm3543D3Z235 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 12.2 ms