Protein–RNA interactions for Protein: B2RS91

Rrn3, RNA polymerase I-specific transcription initiation factor RRN3, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrn3B2RS91 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rrn3B2RS91 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC19.43■□□□□ 0.7
Rrn3B2RS91 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC19.43■□□□□ 0.7
Rrn3B2RS91 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rrn3B2RS91 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Rrn3B2RS91 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC19.43■□□□□ 0.7
Rrn3B2RS91 Gm40848-201ENSMUST00000221998 324 ntBASIC19.43■□□□□ 0.7
Rrn3B2RS91 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rrn3B2RS91 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rrn3B2RS91 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rrn3B2RS91 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Rrn3B2RS91 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rrn3B2RS91 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rrn3B2RS91 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC19.42■□□□□ 0.7
Rrn3B2RS91 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Rrn3B2RS91 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC19.42■□□□□ 0.7
Rrn3B2RS91 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
Rrn3B2RS91 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Rrn3B2RS91 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Rrn3B2RS91 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rrn3B2RS91 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Rrn3B2RS91 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Rrn3B2RS91 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rrn3B2RS91 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rrn3B2RS91 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rrn3B2RS91 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Rrn3B2RS91 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rrn3B2RS91 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Rrn3B2RS91 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC19.41■□□□□ 0.7
Rrn3B2RS91 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rrn3B2RS91 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rrn3B2RS91 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Rrn3B2RS91 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Rrn3B2RS91 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rrn3B2RS91 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Rrn3B2RS91 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Rrn3B2RS91 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rrn3B2RS91 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
Rrn3B2RS91 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rrn3B2RS91 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rrn3B2RS91 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rrn3B2RS91 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rrn3B2RS91 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rrn3B2RS91 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rrn3B2RS91 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rrn3B2RS91 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rrn3B2RS91 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rrn3B2RS91 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rrn3B2RS91 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rrn3B2RS91 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rrn3B2RS91 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Rrn3B2RS91 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rrn3B2RS91 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rrn3B2RS91 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rrn3B2RS91 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Rrn3B2RS91 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rrn3B2RS91 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rrn3B2RS91 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rrn3B2RS91 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Rrn3B2RS91 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC19.39■□□□□ 0.69
Rrn3B2RS91 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Rrn3B2RS91 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC19.39■□□□□ 0.69
Rrn3B2RS91 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
Rrn3B2RS91 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Rrn3B2RS91 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rrn3B2RS91 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rrn3B2RS91 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC19.38■□□□□ 0.69
Rrn3B2RS91 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Rrn3B2RS91 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC19.38■□□□□ 0.69
Rrn3B2RS91 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Rrn3B2RS91 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rrn3B2RS91 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rrn3B2RS91 Cdkn3-203ENSMUST00000227149 1952 ntBASIC19.37■□□□□ 0.69
Rrn3B2RS91 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Rrn3B2RS91 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC19.37■□□□□ 0.69
Rrn3B2RS91 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rrn3B2RS91 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Rrn3B2RS91 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Rrn3B2RS91 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rrn3B2RS91 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rrn3B2RS91 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rrn3B2RS91 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rrn3B2RS91 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC19.37■□□□□ 0.69
Rrn3B2RS91 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Rrn3B2RS91 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rrn3B2RS91 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rrn3B2RS91 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC19.36■□□□□ 0.69
Rrn3B2RS91 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rrn3B2RS91 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rrn3B2RS91 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC19.36■□□□□ 0.69
Rrn3B2RS91 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rrn3B2RS91 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rrn3B2RS91 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rrn3B2RS91 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rrn3B2RS91 AA386476-201ENSMUST00000098781 1665 ntBASIC19.36■□□□□ 0.69
Rrn3B2RS91 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC19.36■□□□□ 0.69
Rrn3B2RS91 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rrn3B2RS91 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Rrn3B2RS91 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rrn3B2RS91 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms