Protein–RNA interactions for Protein: A0A1W2P7H6

Mindy4b-ps, MINDY lysine 48 deubiquitinase 4B, pseudogene, mousemouse

Predictions only

Length 457 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mindy4b-psA0A1W2P7H6 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC20.51■□□□□ 0.87
Mindy4b-psA0A1W2P7H6 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Mindy4b-psA0A1W2P7H6 Gm20100-201ENSMUST00000209418 2272 ntBASIC20.51■□□□□ 0.87
Mindy4b-psA0A1W2P7H6 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Mindy4b-psA0A1W2P7H6 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Mindy4b-psA0A1W2P7H6 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC20.51■□□□□ 0.87
Mindy4b-psA0A1W2P7H6 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC20.51■□□□□ 0.87
Mindy4b-psA0A1W2P7H6 AC099934.2-201ENSMUST00000196389 70 ntBASIC20.51■□□□□ 0.87
Mindy4b-psA0A1W2P7H6 AC156953.1-201ENSMUST00000196953 70 ntBASIC20.51■□□□□ 0.87
Mindy4b-psA0A1W2P7H6 AC157822.2-201ENSMUST00000200291 70 ntBASIC20.51■□□□□ 0.87
Mindy4b-psA0A1W2P7H6 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Mindy4b-psA0A1W2P7H6 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Mindy4b-psA0A1W2P7H6 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Mindy4b-psA0A1W2P7H6 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Mindy4b-psA0A1W2P7H6 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Mindy4b-psA0A1W2P7H6 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Mindy4b-psA0A1W2P7H6 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Mindy4b-psA0A1W2P7H6 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Mindy4b-psA0A1W2P7H6 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Mindy4b-psA0A1W2P7H6 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Mindy4b-psA0A1W2P7H6 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Mindy4b-psA0A1W2P7H6 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Mindy4b-psA0A1W2P7H6 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Mindy4b-psA0A1W2P7H6 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Mindy4b-psA0A1W2P7H6 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC20.5■□□□□ 0.87
Mindy4b-psA0A1W2P7H6 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Mindy4b-psA0A1W2P7H6 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Mindy4b-psA0A1W2P7H6 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Mindy4b-psA0A1W2P7H6 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC20.5■□□□□ 0.87
Mindy4b-psA0A1W2P7H6 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Mindy4b-psA0A1W2P7H6 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC20.49■□□□□ 0.87
Mindy4b-psA0A1W2P7H6 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Mindy4b-psA0A1W2P7H6 Gm34220-201ENSMUST00000223001 2709 ntBASIC20.49■□□□□ 0.87
Mindy4b-psA0A1W2P7H6 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Mindy4b-psA0A1W2P7H6 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC20.49■□□□□ 0.87
Mindy4b-psA0A1W2P7H6 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Mindy4b-psA0A1W2P7H6 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Mindy4b-psA0A1W2P7H6 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Mindy4b-psA0A1W2P7H6 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Mindy4b-psA0A1W2P7H6 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Mindy4b-psA0A1W2P7H6 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Mindy4b-psA0A1W2P7H6 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Mindy4b-psA0A1W2P7H6 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Mindy4b-psA0A1W2P7H6 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Mindy4b-psA0A1W2P7H6 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Mindy4b-psA0A1W2P7H6 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Mindy4b-psA0A1W2P7H6 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Mindy4b-psA0A1W2P7H6 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC20.47■□□□□ 0.87
Mindy4b-psA0A1W2P7H6 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Mindy4b-psA0A1W2P7H6 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Mindy4b-psA0A1W2P7H6 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Mindy4b-psA0A1W2P7H6 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC20.47■□□□□ 0.87
Mindy4b-psA0A1W2P7H6 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC20.47■□□□□ 0.87
Mindy4b-psA0A1W2P7H6 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Mindy4b-psA0A1W2P7H6 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Mindy4b-psA0A1W2P7H6 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC20.46■□□□□ 0.87
Mindy4b-psA0A1W2P7H6 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Mindy4b-psA0A1W2P7H6 Gm9988-201ENSMUST00000069786 435 ntBASIC20.46■□□□□ 0.87
Mindy4b-psA0A1W2P7H6 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Mindy4b-psA0A1W2P7H6 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Mindy4b-psA0A1W2P7H6 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.87
Mindy4b-psA0A1W2P7H6 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
Mindy4b-psA0A1W2P7H6 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Mindy4b-psA0A1W2P7H6 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC20.45■□□□□ 0.86
Mindy4b-psA0A1W2P7H6 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Mindy4b-psA0A1W2P7H6 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Mindy4b-psA0A1W2P7H6 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Mindy4b-psA0A1W2P7H6 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
Mindy4b-psA0A1W2P7H6 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Mindy4b-psA0A1W2P7H6 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC20.44■□□□□ 0.86
Mindy4b-psA0A1W2P7H6 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC20.44■□□□□ 0.86
Mindy4b-psA0A1W2P7H6 CT030146.1-201ENSMUST00000220919 217 ntBASIC20.44■□□□□ 0.86
Mindy4b-psA0A1W2P7H6 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Mindy4b-psA0A1W2P7H6 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Mindy4b-psA0A1W2P7H6 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Mindy4b-psA0A1W2P7H6 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Mindy4b-psA0A1W2P7H6 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Mindy4b-psA0A1W2P7H6 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Mindy4b-psA0A1W2P7H6 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Mindy4b-psA0A1W2P7H6 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Mindy4b-psA0A1W2P7H6 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Mindy4b-psA0A1W2P7H6 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC20.43■□□□□ 0.86
Mindy4b-psA0A1W2P7H6 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
Mindy4b-psA0A1W2P7H6 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC20.43■□□□□ 0.86
Mindy4b-psA0A1W2P7H6 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Mindy4b-psA0A1W2P7H6 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Mindy4b-psA0A1W2P7H6 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Mindy4b-psA0A1W2P7H6 Gm42778-201ENSMUST00000199644 553 ntBASIC20.42■□□□□ 0.86
Mindy4b-psA0A1W2P7H6 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Mindy4b-psA0A1W2P7H6 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Mindy4b-psA0A1W2P7H6 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Mindy4b-psA0A1W2P7H6 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Mindy4b-psA0A1W2P7H6 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Mindy4b-psA0A1W2P7H6 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Mindy4b-psA0A1W2P7H6 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Mindy4b-psA0A1W2P7H6 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Mindy4b-psA0A1W2P7H6 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Mindy4b-psA0A1W2P7H6 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Mindy4b-psA0A1W2P7H6 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC20.41■□□□□ 0.86
Mindy4b-psA0A1W2P7H6 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms