Protein–RNA interactions for Protein: A0A1B0GSK3

Lnp1, Leukemia NUP98 fusion partner 1, mousemouse

Predictions only

Length 178 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lnp1A0A1B0GSK3 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC16.11■□□□□ 0.17
Lnp1A0A1B0GSK3 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Lnp1A0A1B0GSK3 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Lnp1A0A1B0GSK3 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Lnp1A0A1B0GSK3 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC16.1■□□□□ 0.17
Lnp1A0A1B0GSK3 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Lnp1A0A1B0GSK3 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Lnp1A0A1B0GSK3 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Lnp1A0A1B0GSK3 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Lnp1A0A1B0GSK3 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC16.1■□□□□ 0.17
Lnp1A0A1B0GSK3 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Lnp1A0A1B0GSK3 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Lnp1A0A1B0GSK3 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC16.1■□□□□ 0.17
Lnp1A0A1B0GSK3 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Lnp1A0A1B0GSK3 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Lnp1A0A1B0GSK3 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Lnp1A0A1B0GSK3 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC16.1■□□□□ 0.17
Lnp1A0A1B0GSK3 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Lnp1A0A1B0GSK3 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Lnp1A0A1B0GSK3 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Lnp1A0A1B0GSK3 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Lnp1A0A1B0GSK3 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Lnp1A0A1B0GSK3 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Lnp1A0A1B0GSK3 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Lnp1A0A1B0GSK3 Mir7075-201ENSMUST00000184187 82 ntBASIC16.09■□□□□ 0.17
Lnp1A0A1B0GSK3 Gm7160-202ENSMUST00000188519 1027 ntBASIC16.09■□□□□ 0.17
Lnp1A0A1B0GSK3 Appbp2os-202ENSMUST00000206972 447 ntBASIC16.09■□□□□ 0.17
Lnp1A0A1B0GSK3 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Lnp1A0A1B0GSK3 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Lnp1A0A1B0GSK3 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Lnp1A0A1B0GSK3 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Lnp1A0A1B0GSK3 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC16.09■□□□□ 0.17
Lnp1A0A1B0GSK3 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC16.09■□□□□ 0.17
Lnp1A0A1B0GSK3 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Lnp1A0A1B0GSK3 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC16.09■□□□□ 0.17
Lnp1A0A1B0GSK3 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Lnp1A0A1B0GSK3 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Lnp1A0A1B0GSK3 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Lnp1A0A1B0GSK3 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Lnp1A0A1B0GSK3 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Lnp1A0A1B0GSK3 Flvcr1-202ENSMUST00000191946 1216 ntBASIC16.08■□□□□ 0.16
Lnp1A0A1B0GSK3 Gm45417-201ENSMUST00000209533 758 ntBASIC16.08■□□□□ 0.16
Lnp1A0A1B0GSK3 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Lnp1A0A1B0GSK3 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Lnp1A0A1B0GSK3 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Lnp1A0A1B0GSK3 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Lnp1A0A1B0GSK3 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Lnp1A0A1B0GSK3 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Lnp1A0A1B0GSK3 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Lnp1A0A1B0GSK3 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Lnp1A0A1B0GSK3 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Lnp1A0A1B0GSK3 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Lnp1A0A1B0GSK3 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Lnp1A0A1B0GSK3 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Lnp1A0A1B0GSK3 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
Lnp1A0A1B0GSK3 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Lnp1A0A1B0GSK3 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Lnp1A0A1B0GSK3 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Lnp1A0A1B0GSK3 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Lnp1A0A1B0GSK3 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Lnp1A0A1B0GSK3 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Lnp1A0A1B0GSK3 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Lnp1A0A1B0GSK3 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
Lnp1A0A1B0GSK3 Gm10616-201ENSMUST00000205285 2127 ntBASIC16.06■□□□□ 0.16
Lnp1A0A1B0GSK3 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Lnp1A0A1B0GSK3 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Lnp1A0A1B0GSK3 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Lnp1A0A1B0GSK3 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Lnp1A0A1B0GSK3 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Lnp1A0A1B0GSK3 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Lnp1A0A1B0GSK3 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Lnp1A0A1B0GSK3 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
Lnp1A0A1B0GSK3 Gm12821-201ENSMUST00000120022 600 ntBASIC16.06■□□□□ 0.16
Lnp1A0A1B0GSK3 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Lnp1A0A1B0GSK3 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Lnp1A0A1B0GSK3 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Lnp1A0A1B0GSK3 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Lnp1A0A1B0GSK3 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Lnp1A0A1B0GSK3 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Lnp1A0A1B0GSK3 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Lnp1A0A1B0GSK3 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Lnp1A0A1B0GSK3 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Lnp1A0A1B0GSK3 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Lnp1A0A1B0GSK3 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC16.05■□□□□ 0.16
Lnp1A0A1B0GSK3 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Lnp1A0A1B0GSK3 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC16.05■□□□□ 0.16
Lnp1A0A1B0GSK3 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Lnp1A0A1B0GSK3 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC16.05■□□□□ 0.16
Lnp1A0A1B0GSK3 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Lnp1A0A1B0GSK3 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC16.05■□□□□ 0.16
Lnp1A0A1B0GSK3 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC16.05■□□□□ 0.16
Lnp1A0A1B0GSK3 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Lnp1A0A1B0GSK3 Gm42911-201ENSMUST00000199360 1630 ntBASIC16.05■□□□□ 0.16
Lnp1A0A1B0GSK3 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Lnp1A0A1B0GSK3 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC16.04■□□□□ 0.16
Lnp1A0A1B0GSK3 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Lnp1A0A1B0GSK3 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Lnp1A0A1B0GSK3 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Lnp1A0A1B0GSK3 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Lnp1A0A1B0GSK3 Serp2-204ENSMUST00000228055 705 ntBASIC16.04■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms