Protein–RNA interactions for Protein: A0A140LIT1

Ccdc194, Coiled-coil domain-containing protein 194, mousemouse

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc194A0A140LIT1 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC19.26■□□□□ 0.67
Ccdc194A0A140LIT1 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc194A0A140LIT1 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ccdc194A0A140LIT1 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ccdc194A0A140LIT1 AC122335.2-201ENSMUST00000213901 6181 ntBASIC19.25■□□□□ 0.67
Ccdc194A0A140LIT1 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC19.25■□□□□ 0.67
Ccdc194A0A140LIT1 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ccdc194A0A140LIT1 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Ccdc194A0A140LIT1 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC19.25■□□□□ 0.67
Ccdc194A0A140LIT1 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ccdc194A0A140LIT1 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ccdc194A0A140LIT1 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC19.24■□□□□ 0.67
Ccdc194A0A140LIT1 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC19.24■□□□□ 0.67
Ccdc194A0A140LIT1 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ccdc194A0A140LIT1 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Ccdc194A0A140LIT1 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Ccdc194A0A140LIT1 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC19.24■□□□□ 0.67
Ccdc194A0A140LIT1 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Ccdc194A0A140LIT1 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC19.24■□□□□ 0.67
Ccdc194A0A140LIT1 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Ccdc194A0A140LIT1 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ccdc194A0A140LIT1 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ccdc194A0A140LIT1 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ccdc194A0A140LIT1 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ccdc194A0A140LIT1 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ccdc194A0A140LIT1 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ccdc194A0A140LIT1 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ccdc194A0A140LIT1 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Ccdc194A0A140LIT1 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
Ccdc194A0A140LIT1 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ccdc194A0A140LIT1 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ccdc194A0A140LIT1 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ccdc194A0A140LIT1 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ccdc194A0A140LIT1 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Ccdc194A0A140LIT1 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Ccdc194A0A140LIT1 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ccdc194A0A140LIT1 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ccdc194A0A140LIT1 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ccdc194A0A140LIT1 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ccdc194A0A140LIT1 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ccdc194A0A140LIT1 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ccdc194A0A140LIT1 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Ccdc194A0A140LIT1 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ccdc194A0A140LIT1 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ccdc194A0A140LIT1 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ccdc194A0A140LIT1 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ccdc194A0A140LIT1 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ccdc194A0A140LIT1 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ccdc194A0A140LIT1 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ccdc194A0A140LIT1 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ccdc194A0A140LIT1 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ccdc194A0A140LIT1 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Ccdc194A0A140LIT1 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC19.21■□□□□ 0.67
Ccdc194A0A140LIT1 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC19.21■□□□□ 0.67
Ccdc194A0A140LIT1 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC19.21■□□□□ 0.67
Ccdc194A0A140LIT1 Golgb1-201ENSMUST00000023534 498 ntBASIC19.21■□□□□ 0.67
Ccdc194A0A140LIT1 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ccdc194A0A140LIT1 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ccdc194A0A140LIT1 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ccdc194A0A140LIT1 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ccdc194A0A140LIT1 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ccdc194A0A140LIT1 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ccdc194A0A140LIT1 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Ccdc194A0A140LIT1 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ccdc194A0A140LIT1 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC19.2■□□□□ 0.66
Ccdc194A0A140LIT1 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Ccdc194A0A140LIT1 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ccdc194A0A140LIT1 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Ccdc194A0A140LIT1 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC19.2■□□□□ 0.66
Ccdc194A0A140LIT1 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
Ccdc194A0A140LIT1 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ccdc194A0A140LIT1 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Ccdc194A0A140LIT1 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ccdc194A0A140LIT1 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ccdc194A0A140LIT1 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ccdc194A0A140LIT1 Gm12922-201ENSMUST00000120626 809 ntBASIC19.19■□□□□ 0.66
Ccdc194A0A140LIT1 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC19.19■□□□□ 0.66
Ccdc194A0A140LIT1 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Ccdc194A0A140LIT1 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC19.19■□□□□ 0.66
Ccdc194A0A140LIT1 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ccdc194A0A140LIT1 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC19.19■□□□□ 0.66
Ccdc194A0A140LIT1 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ccdc194A0A140LIT1 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ccdc194A0A140LIT1 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ccdc194A0A140LIT1 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ccdc194A0A140LIT1 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ccdc194A0A140LIT1 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Ccdc194A0A140LIT1 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Ccdc194A0A140LIT1 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ccdc194A0A140LIT1 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ccdc194A0A140LIT1 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
Ccdc194A0A140LIT1 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ccdc194A0A140LIT1 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ccdc194A0A140LIT1 Gm20100-201ENSMUST00000209418 2272 ntBASIC19.17■□□□□ 0.66
Ccdc194A0A140LIT1 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC19.17■□□□□ 0.66
Ccdc194A0A140LIT1 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC19.17■□□□□ 0.66
Ccdc194A0A140LIT1 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC19.17■□□□□ 0.66
Ccdc194A0A140LIT1 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ccdc194A0A140LIT1 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ccdc194A0A140LIT1 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 12.1 ms