Protein–RNA interactions for Protein: A0A0A6YY38

Ighv1-42, Immunoglobulin heavy variable V1-42 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-42A0A0A6YY38 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Ighv1-42A0A0A6YY38 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ighv1-42A0A0A6YY38 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Ighv1-42A0A0A6YY38 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ighv1-42A0A0A6YY38 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ighv1-42A0A0A6YY38 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Ighv1-42A0A0A6YY38 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
Ighv1-42A0A0A6YY38 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC17.96■□□□□ 0.47
Ighv1-42A0A0A6YY38 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Ighv1-42A0A0A6YY38 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ighv1-42A0A0A6YY38 Gm6802-201ENSMUST00000167843 1983 ntBASIC17.96■□□□□ 0.47
Ighv1-42A0A0A6YY38 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC17.96■□□□□ 0.47
Ighv1-42A0A0A6YY38 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Ighv1-42A0A0A6YY38 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ighv1-42A0A0A6YY38 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.46
Ighv1-42A0A0A6YY38 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC17.96■□□□□ 0.46
Ighv1-42A0A0A6YY38 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC17.95■□□□□ 0.46
Ighv1-42A0A0A6YY38 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC17.95■□□□□ 0.46
Ighv1-42A0A0A6YY38 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
Ighv1-42A0A0A6YY38 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ighv1-42A0A0A6YY38 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ighv1-42A0A0A6YY38 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ighv1-42A0A0A6YY38 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Ighv1-42A0A0A6YY38 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ighv1-42A0A0A6YY38 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Ighv1-42A0A0A6YY38 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Ighv1-42A0A0A6YY38 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Ighv1-42A0A0A6YY38 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC17.94■□□□□ 0.46
Ighv1-42A0A0A6YY38 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Ighv1-42A0A0A6YY38 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ighv1-42A0A0A6YY38 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Ighv1-42A0A0A6YY38 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ighv1-42A0A0A6YY38 Mir5133-201ENSMUST00000174955 77 ntBASIC17.94■□□□□ 0.46
Ighv1-42A0A0A6YY38 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
Ighv1-42A0A0A6YY38 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC17.94■□□□□ 0.46
Ighv1-42A0A0A6YY38 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC17.94■□□□□ 0.46
Ighv1-42A0A0A6YY38 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC17.94■□□□□ 0.46
Ighv1-42A0A0A6YY38 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ighv1-42A0A0A6YY38 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ighv1-42A0A0A6YY38 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC17.94■□□□□ 0.46
Ighv1-42A0A0A6YY38 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ighv1-42A0A0A6YY38 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Ighv1-42A0A0A6YY38 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ighv1-42A0A0A6YY38 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ighv1-42A0A0A6YY38 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ighv1-42A0A0A6YY38 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ighv1-42A0A0A6YY38 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC17.93■□□□□ 0.46
Ighv1-42A0A0A6YY38 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Ighv1-42A0A0A6YY38 Gm13534-201ENSMUST00000121169 513 ntBASIC17.93■□□□□ 0.46
Ighv1-42A0A0A6YY38 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ighv1-42A0A0A6YY38 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ighv1-42A0A0A6YY38 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC17.93■□□□□ 0.46
Ighv1-42A0A0A6YY38 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ighv1-42A0A0A6YY38 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ighv1-42A0A0A6YY38 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ighv1-42A0A0A6YY38 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Ighv1-42A0A0A6YY38 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ighv1-42A0A0A6YY38 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC17.92■□□□□ 0.46
Ighv1-42A0A0A6YY38 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ighv1-42A0A0A6YY38 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ighv1-42A0A0A6YY38 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ighv1-42A0A0A6YY38 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ighv1-42A0A0A6YY38 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
Ighv1-42A0A0A6YY38 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Ighv1-42A0A0A6YY38 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ighv1-42A0A0A6YY38 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Ighv1-42A0A0A6YY38 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC17.91■□□□□ 0.46
Ighv1-42A0A0A6YY38 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Ighv1-42A0A0A6YY38 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ighv1-42A0A0A6YY38 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC17.91■□□□□ 0.46
Ighv1-42A0A0A6YY38 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Ighv1-42A0A0A6YY38 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ighv1-42A0A0A6YY38 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Ighv1-42A0A0A6YY38 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ighv1-42A0A0A6YY38 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC17.9■□□□□ 0.46
Ighv1-42A0A0A6YY38 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC17.9■□□□□ 0.46
Ighv1-42A0A0A6YY38 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC17.9■□□□□ 0.46
Ighv1-42A0A0A6YY38 AC112142.1-201ENSMUST00000228796 918 ntBASIC17.9■□□□□ 0.46
Ighv1-42A0A0A6YY38 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Ighv1-42A0A0A6YY38 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Ighv1-42A0A0A6YY38 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ighv1-42A0A0A6YY38 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ighv1-42A0A0A6YY38 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ighv1-42A0A0A6YY38 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC17.89■□□□□ 0.45
Ighv1-42A0A0A6YY38 Gm7860-201ENSMUST00000121190 879 ntBASIC17.89■□□□□ 0.45
Ighv1-42A0A0A6YY38 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC17.89■□□□□ 0.45
Ighv1-42A0A0A6YY38 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ighv1-42A0A0A6YY38 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ighv1-42A0A0A6YY38 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ighv1-42A0A0A6YY38 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ighv1-42A0A0A6YY38 Gm10655-201ENSMUST00000098658 1397 ntBASIC17.89■□□□□ 0.45
Ighv1-42A0A0A6YY38 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Ighv1-42A0A0A6YY38 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC17.88■□□□□ 0.45
Ighv1-42A0A0A6YY38 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ighv1-42A0A0A6YY38 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Ighv1-42A0A0A6YY38 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ighv1-42A0A0A6YY38 Gm7290-201ENSMUST00000104990 617 ntBASIC17.88■□□□□ 0.45
Ighv1-42A0A0A6YY38 Gm12918-201ENSMUST00000120234 636 ntBASIC17.88■□□□□ 0.45
Ighv1-42A0A0A6YY38 Gm15710-201ENSMUST00000121821 636 ntBASIC17.88■□□□□ 0.45
Ighv1-42A0A0A6YY38 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 69 ms