Protein–RNA interactions for Protein: A0A0A6YXN4

Ighv1-18, Immunoglobulin heavy variable V1-18 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-18A0A0A6YXN4 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Ighv1-18A0A0A6YXN4 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC15.69■□□□□ 0.1
Ighv1-18A0A0A6YXN4 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ighv1-18A0A0A6YXN4 Gm43231-201ENSMUST00000202960 2258 ntBASIC15.69■□□□□ 0.1
Ighv1-18A0A0A6YXN4 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ighv1-18A0A0A6YXN4 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ighv1-18A0A0A6YXN4 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ighv1-18A0A0A6YXN4 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ighv1-18A0A0A6YXN4 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ighv1-18A0A0A6YXN4 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC15.68■□□□□ 0.1
Ighv1-18A0A0A6YXN4 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ighv1-18A0A0A6YXN4 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Ighv1-18A0A0A6YXN4 Gm12821-201ENSMUST00000120022 600 ntBASIC15.68■□□□□ 0.1
Ighv1-18A0A0A6YXN4 Gm43759-201ENSMUST00000196925 1261 ntBASIC15.68■□□□□ 0.1
Ighv1-18A0A0A6YXN4 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC15.68■□□□□ 0.1
Ighv1-18A0A0A6YXN4 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ighv1-18A0A0A6YXN4 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
Ighv1-18A0A0A6YXN4 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ighv1-18A0A0A6YXN4 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ighv1-18A0A0A6YXN4 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ighv1-18A0A0A6YXN4 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ighv1-18A0A0A6YXN4 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ighv1-18A0A0A6YXN4 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ighv1-18A0A0A6YXN4 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Ighv1-18A0A0A6YXN4 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Ighv1-18A0A0A6YXN4 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ighv1-18A0A0A6YXN4 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ighv1-18A0A0A6YXN4 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC15.67■□□□□ 0.1
Ighv1-18A0A0A6YXN4 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ighv1-18A0A0A6YXN4 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC15.67■□□□□ 0.1
Ighv1-18A0A0A6YXN4 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
Ighv1-18A0A0A6YXN4 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Ighv1-18A0A0A6YXN4 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ighv1-18A0A0A6YXN4 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ighv1-18A0A0A6YXN4 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ighv1-18A0A0A6YXN4 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Ighv1-18A0A0A6YXN4 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ighv1-18A0A0A6YXN4 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ighv1-18A0A0A6YXN4 Gm21956-201ENSMUST00000179946 522 ntBASIC15.66■□□□□ 0.1
Ighv1-18A0A0A6YXN4 Appbp2os-202ENSMUST00000206972 447 ntBASIC15.66■□□□□ 0.1
Ighv1-18A0A0A6YXN4 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ighv1-18A0A0A6YXN4 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ighv1-18A0A0A6YXN4 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Ighv1-18A0A0A6YXN4 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ighv1-18A0A0A6YXN4 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ighv1-18A0A0A6YXN4 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ighv1-18A0A0A6YXN4 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ighv1-18A0A0A6YXN4 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ighv1-18A0A0A6YXN4 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ighv1-18A0A0A6YXN4 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ighv1-18A0A0A6YXN4 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ighv1-18A0A0A6YXN4 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ighv1-18A0A0A6YXN4 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC15.65■□□□□ 0.1
Ighv1-18A0A0A6YXN4 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC15.65■□□□□ 0.1
Ighv1-18A0A0A6YXN4 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ighv1-18A0A0A6YXN4 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ighv1-18A0A0A6YXN4 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ighv1-18A0A0A6YXN4 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Ighv1-18A0A0A6YXN4 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC15.64■□□□□ 0.1
Ighv1-18A0A0A6YXN4 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC15.64■□□□□ 0.1
Ighv1-18A0A0A6YXN4 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC15.64■□□□□ 0.1
Ighv1-18A0A0A6YXN4 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Ighv1-18A0A0A6YXN4 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ighv1-18A0A0A6YXN4 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ighv1-18A0A0A6YXN4 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ighv1-18A0A0A6YXN4 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Ighv1-18A0A0A6YXN4 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ighv1-18A0A0A6YXN4 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Ighv1-18A0A0A6YXN4 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ighv1-18A0A0A6YXN4 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ighv1-18A0A0A6YXN4 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ighv1-18A0A0A6YXN4 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ighv1-18A0A0A6YXN4 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
Ighv1-18A0A0A6YXN4 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ighv1-18A0A0A6YXN4 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ighv1-18A0A0A6YXN4 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ighv1-18A0A0A6YXN4 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Ighv1-18A0A0A6YXN4 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC15.63■□□□□ 0.09
Ighv1-18A0A0A6YXN4 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC15.63■□□□□ 0.09
Ighv1-18A0A0A6YXN4 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Ighv1-18A0A0A6YXN4 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ighv1-18A0A0A6YXN4 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ighv1-18A0A0A6YXN4 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Ighv1-18A0A0A6YXN4 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ighv1-18A0A0A6YXN4 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Ighv1-18A0A0A6YXN4 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC15.63■□□□□ 0.09
Ighv1-18A0A0A6YXN4 Krt8-ps-201ENSMUST00000208495 945 ntBASIC15.63■□□□□ 0.09
Ighv1-18A0A0A6YXN4 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ighv1-18A0A0A6YXN4 AC124603.1-201ENSMUST00000223843 308 ntBASIC15.63■□□□□ 0.09
Ighv1-18A0A0A6YXN4 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ighv1-18A0A0A6YXN4 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Ighv1-18A0A0A6YXN4 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ighv1-18A0A0A6YXN4 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Ighv1-18A0A0A6YXN4 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ighv1-18A0A0A6YXN4 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ighv1-18A0A0A6YXN4 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ighv1-18A0A0A6YXN4 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ighv1-18A0A0A6YXN4 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ighv1-18A0A0A6YXN4 Gm8770-201ENSMUST00000121113 1109 ntBASIC15.62■□□□□ 0.09
Ighv1-18A0A0A6YXN4 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms