Protein–RNA interactions for Protein: A0A075B6B4

Trav6-4, T cell receptor alpha variable 6-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-4A0A075B6B4 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav6-4A0A075B6B4 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trav6-4A0A075B6B4 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Trav6-4A0A075B6B4 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Trav6-4A0A075B6B4 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
Trav6-4A0A075B6B4 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC14.92□□□□□ -0.02
Trav6-4A0A075B6B4 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Trav6-4A0A075B6B4 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav6-4A0A075B6B4 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav6-4A0A075B6B4 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC14.92□□□□□ -0.02
Trav6-4A0A075B6B4 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav6-4A0A075B6B4 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav6-4A0A075B6B4 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC14.92□□□□□ -0.02
Trav6-4A0A075B6B4 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trav6-4A0A075B6B4 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav6-4A0A075B6B4 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav6-4A0A075B6B4 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav6-4A0A075B6B4 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Trav6-4A0A075B6B4 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Trav6-4A0A075B6B4 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC14.91□□□□□ -0.02
Trav6-4A0A075B6B4 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav6-4A0A075B6B4 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Trav6-4A0A075B6B4 Smad6-203ENSMUST00000179458 273 ntBASIC14.91□□□□□ -0.02
Trav6-4A0A075B6B4 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trav6-4A0A075B6B4 AC154266.1-201ENSMUST00000223190 503 ntBASIC14.91□□□□□ -0.02
Trav6-4A0A075B6B4 Gm10571-201ENSMUST00000097869 1638 ntBASIC14.91□□□□□ -0.02
Trav6-4A0A075B6B4 AC165080.2-201ENSMUST00000217491 1530 ntBASIC14.91□□□□□ -0.02
Trav6-4A0A075B6B4 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav6-4A0A075B6B4 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav6-4A0A075B6B4 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trav6-4A0A075B6B4 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
Trav6-4A0A075B6B4 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav6-4A0A075B6B4 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trav6-4A0A075B6B4 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Trav6-4A0A075B6B4 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav6-4A0A075B6B4 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC14.9□□□□□ -0.02
Trav6-4A0A075B6B4 Gm43017-201ENSMUST00000198296 752 ntBASIC14.9□□□□□ -0.02
Trav6-4A0A075B6B4 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC14.9□□□□□ -0.02
Trav6-4A0A075B6B4 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav6-4A0A075B6B4 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Trav6-4A0A075B6B4 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav6-4A0A075B6B4 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav6-4A0A075B6B4 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC14.9□□□□□ -0.02
Trav6-4A0A075B6B4 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trav6-4A0A075B6B4 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav6-4A0A075B6B4 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav6-4A0A075B6B4 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Trav6-4A0A075B6B4 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav6-4A0A075B6B4 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trav6-4A0A075B6B4 Gm11421-201ENSMUST00000122124 294 ntBASIC14.89□□□□□ -0.03
Trav6-4A0A075B6B4 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trav6-4A0A075B6B4 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC14.89□□□□□ -0.03
Trav6-4A0A075B6B4 AC137127.1-201ENSMUST00000213466 1078 ntBASIC14.89□□□□□ -0.03
Trav6-4A0A075B6B4 Serp2-204ENSMUST00000228055 705 ntBASIC14.89□□□□□ -0.03
Trav6-4A0A075B6B4 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav6-4A0A075B6B4 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav6-4A0A075B6B4 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav6-4A0A075B6B4 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav6-4A0A075B6B4 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav6-4A0A075B6B4 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC14.88□□□□□ -0.03
Trav6-4A0A075B6B4 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav6-4A0A075B6B4 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav6-4A0A075B6B4 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav6-4A0A075B6B4 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC14.88□□□□□ -0.03
Trav6-4A0A075B6B4 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trav6-4A0A075B6B4 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav6-4A0A075B6B4 Gm26833-201ENSMUST00000180899 440 ntBASIC14.88□□□□□ -0.03
Trav6-4A0A075B6B4 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC14.88□□□□□ -0.03
Trav6-4A0A075B6B4 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Trav6-4A0A075B6B4 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav6-4A0A075B6B4 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav6-4A0A075B6B4 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Trav6-4A0A075B6B4 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC14.88□□□□□ -0.03
Trav6-4A0A075B6B4 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav6-4A0A075B6B4 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav6-4A0A075B6B4 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC14.87□□□□□ -0.03
Trav6-4A0A075B6B4 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav6-4A0A075B6B4 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Trav6-4A0A075B6B4 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav6-4A0A075B6B4 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav6-4A0A075B6B4 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav6-4A0A075B6B4 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC14.87□□□□□ -0.03
Trav6-4A0A075B6B4 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav6-4A0A075B6B4 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav6-4A0A075B6B4 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Trav6-4A0A075B6B4 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC14.87□□□□□ -0.03
Trav6-4A0A075B6B4 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav6-4A0A075B6B4 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav6-4A0A075B6B4 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav6-4A0A075B6B4 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav6-4A0A075B6B4 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Trav6-4A0A075B6B4 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav6-4A0A075B6B4 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trav6-4A0A075B6B4 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Trav6-4A0A075B6B4 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Trav6-4A0A075B6B4 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav6-4A0A075B6B4 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav6-4A0A075B6B4 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav6-4A0A075B6B4 Gm42911-201ENSMUST00000199360 1630 ntBASIC14.86□□□□□ -0.03
Trav6-4A0A075B6B4 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC14.86□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms