Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav6n-6A0A075B6B2 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav6n-6A0A075B6B2 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav6n-6A0A075B6B2 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Trav6n-6A0A075B6B2 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC14.38□□□□□ -0.11
Trav6n-6A0A075B6B2 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trav6n-6A0A075B6B2 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trav6n-6A0A075B6B2 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav6n-6A0A075B6B2 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
Trav6n-6A0A075B6B2 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Trav6n-6A0A075B6B2 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav6n-6A0A075B6B2 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav6n-6A0A075B6B2 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav6n-6A0A075B6B2 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav6n-6A0A075B6B2 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav6n-6A0A075B6B2 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav6n-6A0A075B6B2 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav6n-6A0A075B6B2 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav6n-6A0A075B6B2 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav6n-6A0A075B6B2 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav6n-6A0A075B6B2 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trav6n-6A0A075B6B2 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trav6n-6A0A075B6B2 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav6n-6A0A075B6B2 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Trav6n-6A0A075B6B2 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC14.37□□□□□ -0.11
Trav6n-6A0A075B6B2 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Trav6n-6A0A075B6B2 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trav6n-6A0A075B6B2 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav6n-6A0A075B6B2 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav6n-6A0A075B6B2 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav6n-6A0A075B6B2 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC14.37□□□□□ -0.11
Trav6n-6A0A075B6B2 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Trav6n-6A0A075B6B2 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trav6n-6A0A075B6B2 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav6n-6A0A075B6B2 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav6n-6A0A075B6B2 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trav6n-6A0A075B6B2 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav6n-6A0A075B6B2 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav6n-6A0A075B6B2 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav6n-6A0A075B6B2 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav6n-6A0A075B6B2 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC14.36□□□□□ -0.11
Trav6n-6A0A075B6B2 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav6n-6A0A075B6B2 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC14.36□□□□□ -0.11
Trav6n-6A0A075B6B2 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC14.36□□□□□ -0.11
Trav6n-6A0A075B6B2 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trav6n-6A0A075B6B2 Dapk1-207ENSMUST00000226059 5009 ntBASIC14.36□□□□□ -0.11
Trav6n-6A0A075B6B2 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Trav6n-6A0A075B6B2 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Trav6n-6A0A075B6B2 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trav6n-6A0A075B6B2 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trav6n-6A0A075B6B2 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Trav6n-6A0A075B6B2 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav6n-6A0A075B6B2 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Trav6n-6A0A075B6B2 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Trav6n-6A0A075B6B2 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trav6n-6A0A075B6B2 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC14.35□□□□□ -0.11
Trav6n-6A0A075B6B2 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC14.35□□□□□ -0.11
Trav6n-6A0A075B6B2 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav6n-6A0A075B6B2 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC14.35□□□□□ -0.11
Trav6n-6A0A075B6B2 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trav6n-6A0A075B6B2 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav6n-6A0A075B6B2 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC14.35□□□□□ -0.11
Trav6n-6A0A075B6B2 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav6n-6A0A075B6B2 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC14.35□□□□□ -0.11
Trav6n-6A0A075B6B2 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Trav6n-6A0A075B6B2 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav6n-6A0A075B6B2 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Trav6n-6A0A075B6B2 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trav6n-6A0A075B6B2 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav6n-6A0A075B6B2 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav6n-6A0A075B6B2 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav6n-6A0A075B6B2 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav6n-6A0A075B6B2 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav6n-6A0A075B6B2 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav6n-6A0A075B6B2 Gm45141-201ENSMUST00000206502 1888 ntBASIC14.34□□□□□ -0.11
Trav6n-6A0A075B6B2 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav6n-6A0A075B6B2 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC14.34□□□□□ -0.11
Trav6n-6A0A075B6B2 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trav6n-6A0A075B6B2 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC14.34□□□□□ -0.11
Trav6n-6A0A075B6B2 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav6n-6A0A075B6B2 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav6n-6A0A075B6B2 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Trav6n-6A0A075B6B2 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trav6n-6A0A075B6B2 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trav6n-6A0A075B6B2 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trav6n-6A0A075B6B2 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trav6n-6A0A075B6B2 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Trav6n-6A0A075B6B2 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC14.33□□□□□ -0.12
Trav6n-6A0A075B6B2 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav6n-6A0A075B6B2 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trav6n-6A0A075B6B2 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav6n-6A0A075B6B2 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav6n-6A0A075B6B2 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Trav6n-6A0A075B6B2 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav6n-6A0A075B6B2 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Trav6n-6A0A075B6B2 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav6n-6A0A075B6B2 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav6n-6A0A075B6B2 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav6n-6A0A075B6B2 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav6n-6A0A075B6B2 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms