Protein–RNA interactions for Protein: A0A075B6A6

Trav6n-7, T cell receptor alpha variable 6N-7 (Fragment), mousemouse

Predictions only

Length 116 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-7A0A075B6A6 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC16.45■□□□□ 0.22
Trav6n-7A0A075B6A6 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav6n-7A0A075B6A6 Gm20100-201ENSMUST00000209418 2272 ntBASIC16.44■□□□□ 0.22
Trav6n-7A0A075B6A6 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Trav6n-7A0A075B6A6 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav6n-7A0A075B6A6 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav6n-7A0A075B6A6 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav6n-7A0A075B6A6 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav6n-7A0A075B6A6 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav6n-7A0A075B6A6 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Trav6n-7A0A075B6A6 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav6n-7A0A075B6A6 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav6n-7A0A075B6A6 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Trav6n-7A0A075B6A6 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Trav6n-7A0A075B6A6 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav6n-7A0A075B6A6 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav6n-7A0A075B6A6 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav6n-7A0A075B6A6 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Trav6n-7A0A075B6A6 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC16.44■□□□□ 0.22
Trav6n-7A0A075B6A6 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC16.43■□□□□ 0.22
Trav6n-7A0A075B6A6 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav6n-7A0A075B6A6 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
Trav6n-7A0A075B6A6 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav6n-7A0A075B6A6 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav6n-7A0A075B6A6 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
Trav6n-7A0A075B6A6 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav6n-7A0A075B6A6 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav6n-7A0A075B6A6 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC16.43■□□□□ 0.22
Trav6n-7A0A075B6A6 Gm43060-201ENSMUST00000200621 289 ntBASIC16.43■□□□□ 0.22
Trav6n-7A0A075B6A6 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC16.43■□□□□ 0.22
Trav6n-7A0A075B6A6 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC16.43■□□□□ 0.22
Trav6n-7A0A075B6A6 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav6n-7A0A075B6A6 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC16.43■□□□□ 0.22
Trav6n-7A0A075B6A6 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav6n-7A0A075B6A6 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav6n-7A0A075B6A6 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav6n-7A0A075B6A6 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Trav6n-7A0A075B6A6 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav6n-7A0A075B6A6 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trav6n-7A0A075B6A6 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav6n-7A0A075B6A6 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav6n-7A0A075B6A6 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav6n-7A0A075B6A6 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav6n-7A0A075B6A6 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC16.42■□□□□ 0.22
Trav6n-7A0A075B6A6 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Trav6n-7A0A075B6A6 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trav6n-7A0A075B6A6 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav6n-7A0A075B6A6 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Trav6n-7A0A075B6A6 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav6n-7A0A075B6A6 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav6n-7A0A075B6A6 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav6n-7A0A075B6A6 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav6n-7A0A075B6A6 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Trav6n-7A0A075B6A6 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Trav6n-7A0A075B6A6 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav6n-7A0A075B6A6 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav6n-7A0A075B6A6 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav6n-7A0A075B6A6 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav6n-7A0A075B6A6 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav6n-7A0A075B6A6 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav6n-7A0A075B6A6 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Trav6n-7A0A075B6A6 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Trav6n-7A0A075B6A6 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Trav6n-7A0A075B6A6 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav6n-7A0A075B6A6 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav6n-7A0A075B6A6 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav6n-7A0A075B6A6 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav6n-7A0A075B6A6 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Trav6n-7A0A075B6A6 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav6n-7A0A075B6A6 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav6n-7A0A075B6A6 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav6n-7A0A075B6A6 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav6n-7A0A075B6A6 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav6n-7A0A075B6A6 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
Trav6n-7A0A075B6A6 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Trav6n-7A0A075B6A6 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC16.4■□□□□ 0.22
Trav6n-7A0A075B6A6 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC16.4■□□□□ 0.22
Trav6n-7A0A075B6A6 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav6n-7A0A075B6A6 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav6n-7A0A075B6A6 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav6n-7A0A075B6A6 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav6n-7A0A075B6A6 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav6n-7A0A075B6A6 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Trav6n-7A0A075B6A6 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Trav6n-7A0A075B6A6 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC16.39■□□□□ 0.21
Trav6n-7A0A075B6A6 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Trav6n-7A0A075B6A6 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav6n-7A0A075B6A6 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Trav6n-7A0A075B6A6 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
Trav6n-7A0A075B6A6 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC16.39■□□□□ 0.21
Trav6n-7A0A075B6A6 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav6n-7A0A075B6A6 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav6n-7A0A075B6A6 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Trav6n-7A0A075B6A6 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC16.39■□□□□ 0.21
Trav6n-7A0A075B6A6 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav6n-7A0A075B6A6 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav6n-7A0A075B6A6 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav6n-7A0A075B6A6 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Trav6n-7A0A075B6A6 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav6n-7A0A075B6A6 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC16.38■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms