Protein–RNA interactions for Protein: A0A075B651

Trav4-4-dv10, T cell receptor alpha variable 4-4-DV10 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-4-dv10A0A075B651 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav4-4-dv10A0A075B651 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trav4-4-dv10A0A075B651 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav4-4-dv10A0A075B651 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav4-4-dv10A0A075B651 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Trav4-4-dv10A0A075B651 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Trav4-4-dv10A0A075B651 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trav4-4-dv10A0A075B651 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav4-4-dv10A0A075B651 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav4-4-dv10A0A075B651 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav4-4-dv10A0A075B651 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav4-4-dv10A0A075B651 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav4-4-dv10A0A075B651 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trav4-4-dv10A0A075B651 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trav4-4-dv10A0A075B651 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav4-4-dv10A0A075B651 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav4-4-dv10A0A075B651 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav4-4-dv10A0A075B651 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Trav4-4-dv10A0A075B651 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav4-4-dv10A0A075B651 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav4-4-dv10A0A075B651 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav4-4-dv10A0A075B651 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Trav4-4-dv10A0A075B651 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav4-4-dv10A0A075B651 Gm27045-201ENSMUST00000182145 1402 ntBASIC15.08■□□□□ 0
Trav4-4-dv10A0A075B651 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trav4-4-dv10A0A075B651 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trav4-4-dv10A0A075B651 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Trav4-4-dv10A0A075B651 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav4-4-dv10A0A075B651 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav4-4-dv10A0A075B651 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav4-4-dv10A0A075B651 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav4-4-dv10A0A075B651 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Trav4-4-dv10A0A075B651 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC15.07■□□□□ 0
Trav4-4-dv10A0A075B651 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC15.07■□□□□ 0
Trav4-4-dv10A0A075B651 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav4-4-dv10A0A075B651 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
Trav4-4-dv10A0A075B651 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav4-4-dv10A0A075B651 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trav4-4-dv10A0A075B651 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav4-4-dv10A0A075B651 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC15.07■□□□□ 0
Trav4-4-dv10A0A075B651 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav4-4-dv10A0A075B651 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trav4-4-dv10A0A075B651 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Trav4-4-dv10A0A075B651 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav4-4-dv10A0A075B651 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav4-4-dv10A0A075B651 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Trav4-4-dv10A0A075B651 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav4-4-dv10A0A075B651 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav4-4-dv10A0A075B651 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav4-4-dv10A0A075B651 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Trav4-4-dv10A0A075B651 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC15.06■□□□□ 0
Trav4-4-dv10A0A075B651 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Trav4-4-dv10A0A075B651 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav4-4-dv10A0A075B651 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Trav4-4-dv10A0A075B651 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav4-4-dv10A0A075B651 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trav4-4-dv10A0A075B651 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav4-4-dv10A0A075B651 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC15.06■□□□□ 0
Trav4-4-dv10A0A075B651 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Trav4-4-dv10A0A075B651 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Trav4-4-dv10A0A075B651 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav4-4-dv10A0A075B651 Gm6085-201ENSMUST00000182774 1470 ntBASIC15.06■□□□□ 0
Trav4-4-dv10A0A075B651 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav4-4-dv10A0A075B651 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC15.06■□□□□ 0
Trav4-4-dv10A0A075B651 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC15.05■□□□□ 0
Trav4-4-dv10A0A075B651 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Trav4-4-dv10A0A075B651 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
Trav4-4-dv10A0A075B651 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Trav4-4-dv10A0A075B651 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
Trav4-4-dv10A0A075B651 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC15.05■□□□□ 0
Trav4-4-dv10A0A075B651 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Trav4-4-dv10A0A075B651 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
Trav4-4-dv10A0A075B651 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav4-4-dv10A0A075B651 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Trav4-4-dv10A0A075B651 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav4-4-dv10A0A075B651 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Trav4-4-dv10A0A075B651 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav4-4-dv10A0A075B651 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav4-4-dv10A0A075B651 BC021767-201ENSMUST00000126387 1716 ntBASIC15.05■□□□□ -0
Trav4-4-dv10A0A075B651 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC15.05■□□□□ -0
Trav4-4-dv10A0A075B651 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC15.05■□□□□ -0
Trav4-4-dv10A0A075B651 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav4-4-dv10A0A075B651 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav4-4-dv10A0A075B651 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Trav4-4-dv10A0A075B651 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Trav4-4-dv10A0A075B651 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav4-4-dv10A0A075B651 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav4-4-dv10A0A075B651 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC15.04■□□□□ -0
Trav4-4-dv10A0A075B651 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC15.04■□□□□ -0
Trav4-4-dv10A0A075B651 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC15.04■□□□□ -0
Trav4-4-dv10A0A075B651 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav4-4-dv10A0A075B651 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav4-4-dv10A0A075B651 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Trav4-4-dv10A0A075B651 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Trav4-4-dv10A0A075B651 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC15.04■□□□□ -0
Trav4-4-dv10A0A075B651 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav4-4-dv10A0A075B651 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC15.04■□□□□ -0
Trav4-4-dv10A0A075B651 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Trav4-4-dv10A0A075B651 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Trav4-4-dv10A0A075B651 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms