Protein–RNA interactions for Protein: A0A075B645

Trav14n-3, T cell receptor alpha variable 14N-3 (Fragment), mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav14n-3A0A075B645 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav14n-3A0A075B645 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC14.63□□□□□ -0.07
Trav14n-3A0A075B645 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trav14n-3A0A075B645 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav14n-3A0A075B645 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trav14n-3A0A075B645 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Trav14n-3A0A075B645 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trav14n-3A0A075B645 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav14n-3A0A075B645 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav14n-3A0A075B645 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC14.63□□□□□ -0.07
Trav14n-3A0A075B645 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav14n-3A0A075B645 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trav14n-3A0A075B645 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav14n-3A0A075B645 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav14n-3A0A075B645 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trav14n-3A0A075B645 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Trav14n-3A0A075B645 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
Trav14n-3A0A075B645 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav14n-3A0A075B645 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trav14n-3A0A075B645 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC14.62□□□□□ -0.07
Trav14n-3A0A075B645 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav14n-3A0A075B645 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trav14n-3A0A075B645 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Trav14n-3A0A075B645 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Trav14n-3A0A075B645 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC14.62□□□□□ -0.07
Trav14n-3A0A075B645 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav14n-3A0A075B645 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trav14n-3A0A075B645 Gm5953-201ENSMUST00000220644 2616 ntBASIC14.62□□□□□ -0.07
Trav14n-3A0A075B645 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav14n-3A0A075B645 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav14n-3A0A075B645 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Trav14n-3A0A075B645 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC14.61□□□□□ -0.07
Trav14n-3A0A075B645 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav14n-3A0A075B645 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Trav14n-3A0A075B645 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
Trav14n-3A0A075B645 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Trav14n-3A0A075B645 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC14.61□□□□□ -0.07
Trav14n-3A0A075B645 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
Trav14n-3A0A075B645 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
Trav14n-3A0A075B645 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trav14n-3A0A075B645 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC14.61□□□□□ -0.07
Trav14n-3A0A075B645 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav14n-3A0A075B645 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Trav14n-3A0A075B645 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav14n-3A0A075B645 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
Trav14n-3A0A075B645 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trav14n-3A0A075B645 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav14n-3A0A075B645 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Trav14n-3A0A075B645 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC14.6□□□□□ -0.07
Trav14n-3A0A075B645 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trav14n-3A0A075B645 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC14.6□□□□□ -0.07
Trav14n-3A0A075B645 Gm14523-201ENSMUST00000117260 558 ntBASIC14.6□□□□□ -0.07
Trav14n-3A0A075B645 Gm18688-201ENSMUST00000204695 1859 ntBASIC14.6□□□□□ -0.07
Trav14n-3A0A075B645 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trav14n-3A0A075B645 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav14n-3A0A075B645 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav14n-3A0A075B645 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trav14n-3A0A075B645 Gm10620-201ENSMUST00000098379 1332 ntBASIC14.6□□□□□ -0.07
Trav14n-3A0A075B645 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav14n-3A0A075B645 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trav14n-3A0A075B645 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav14n-3A0A075B645 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav14n-3A0A075B645 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav14n-3A0A075B645 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav14n-3A0A075B645 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC14.59□□□□□ -0.07
Trav14n-3A0A075B645 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav14n-3A0A075B645 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav14n-3A0A075B645 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trav14n-3A0A075B645 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trav14n-3A0A075B645 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trav14n-3A0A075B645 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trav14n-3A0A075B645 AC124603.1-201ENSMUST00000223843 308 ntBASIC14.59□□□□□ -0.07
Trav14n-3A0A075B645 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trav14n-3A0A075B645 Rncr4-201ENSMUST00000194541 2234 ntBASIC14.59□□□□□ -0.07
Trav14n-3A0A075B645 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC14.59□□□□□ -0.07
Trav14n-3A0A075B645 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav14n-3A0A075B645 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav14n-3A0A075B645 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav14n-3A0A075B645 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trav14n-3A0A075B645 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Trav14n-3A0A075B645 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Trav14n-3A0A075B645 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav14n-3A0A075B645 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.07
Trav14n-3A0A075B645 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Trav14n-3A0A075B645 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Trav14n-3A0A075B645 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav14n-3A0A075B645 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav14n-3A0A075B645 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Trav14n-3A0A075B645 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Trav14n-3A0A075B645 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav14n-3A0A075B645 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav14n-3A0A075B645 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Trav14n-3A0A075B645 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Trav14n-3A0A075B645 Gm27502-201ENSMUST00000183495 199 ntBASIC14.58□□□□□ -0.08
Trav14n-3A0A075B645 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Trav14n-3A0A075B645 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav14n-3A0A075B645 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Trav14n-3A0A075B645 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Trav14n-3A0A075B645 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Trav14n-3A0A075B645 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 115.3 ms