Protein–RNA interactions for Protein: A0A075B644

Trav13-1, T cell receptor alpha variable 13-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-1A0A075B644 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Trav13-1A0A075B644 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC13.74□□□□□ -0.21
Trav13-1A0A075B644 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav13-1A0A075B644 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trav13-1A0A075B644 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trav13-1A0A075B644 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav13-1A0A075B644 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav13-1A0A075B644 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav13-1A0A075B644 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav13-1A0A075B644 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav13-1A0A075B644 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trav13-1A0A075B644 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav13-1A0A075B644 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
Trav13-1A0A075B644 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav13-1A0A075B644 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trav13-1A0A075B644 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav13-1A0A075B644 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC13.73□□□□□ -0.21
Trav13-1A0A075B644 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav13-1A0A075B644 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Trav13-1A0A075B644 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Trav13-1A0A075B644 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav13-1A0A075B644 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Trav13-1A0A075B644 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav13-1A0A075B644 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav13-1A0A075B644 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav13-1A0A075B644 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav13-1A0A075B644 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav13-1A0A075B644 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Trav13-1A0A075B644 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC13.72□□□□□ -0.21
Trav13-1A0A075B644 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Trav13-1A0A075B644 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav13-1A0A075B644 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav13-1A0A075B644 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav13-1A0A075B644 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trav13-1A0A075B644 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC13.71□□□□□ -0.21
Trav13-1A0A075B644 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav13-1A0A075B644 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav13-1A0A075B644 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC13.71□□□□□ -0.21
Trav13-1A0A075B644 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trav13-1A0A075B644 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav13-1A0A075B644 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC13.71□□□□□ -0.21
Trav13-1A0A075B644 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav13-1A0A075B644 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Trav13-1A0A075B644 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav13-1A0A075B644 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav13-1A0A075B644 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trav13-1A0A075B644 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trav13-1A0A075B644 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC13.71□□□□□ -0.22
Trav13-1A0A075B644 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trav13-1A0A075B644 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
Trav13-1A0A075B644 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav13-1A0A075B644 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Trav13-1A0A075B644 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav13-1A0A075B644 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav13-1A0A075B644 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trav13-1A0A075B644 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav13-1A0A075B644 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav13-1A0A075B644 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav13-1A0A075B644 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav13-1A0A075B644 Golph3-202ENSMUST00000226517 2359 ntBASIC13.7□□□□□ -0.22
Trav13-1A0A075B644 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trav13-1A0A075B644 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC13.7□□□□□ -0.22
Trav13-1A0A075B644 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC13.7□□□□□ -0.22
Trav13-1A0A075B644 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav13-1A0A075B644 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav13-1A0A075B644 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav13-1A0A075B644 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Trav13-1A0A075B644 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav13-1A0A075B644 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav13-1A0A075B644 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav13-1A0A075B644 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav13-1A0A075B644 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav13-1A0A075B644 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Trav13-1A0A075B644 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC13.69□□□□□ -0.22
Trav13-1A0A075B644 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav13-1A0A075B644 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC13.69□□□□□ -0.22
Trav13-1A0A075B644 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav13-1A0A075B644 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav13-1A0A075B644 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav13-1A0A075B644 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav13-1A0A075B644 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC13.69□□□□□ -0.22
Trav13-1A0A075B644 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
Trav13-1A0A075B644 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC13.69□□□□□ -0.22
Trav13-1A0A075B644 AC137127.1-201ENSMUST00000213466 1078 ntBASIC13.69□□□□□ -0.22
Trav13-1A0A075B644 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav13-1A0A075B644 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav13-1A0A075B644 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav13-1A0A075B644 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav13-1A0A075B644 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav13-1A0A075B644 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Trav13-1A0A075B644 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trav13-1A0A075B644 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC13.68□□□□□ -0.22
Trav13-1A0A075B644 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav13-1A0A075B644 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav13-1A0A075B644 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC13.68□□□□□ -0.22
Trav13-1A0A075B644 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav13-1A0A075B644 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC13.68□□□□□ -0.22
Trav13-1A0A075B644 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Trav13-1A0A075B644 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC13.68□□□□□ -0.22
Trav13-1A0A075B644 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms