Protein–RNA interactions for Protein: A0A075B5Z8

Trav6-1, T cell receptor alpha variable 6-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-1A0A075B5Z8 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Trav6-1A0A075B5Z8 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC15.57■□□□□ 0.08
Trav6-1A0A075B5Z8 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav6-1A0A075B5Z8 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav6-1A0A075B5Z8 Gm27045-201ENSMUST00000182145 1402 ntBASIC15.57■□□□□ 0.08
Trav6-1A0A075B5Z8 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav6-1A0A075B5Z8 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
Trav6-1A0A075B5Z8 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav6-1A0A075B5Z8 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC15.57■□□□□ 0.08
Trav6-1A0A075B5Z8 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav6-1A0A075B5Z8 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav6-1A0A075B5Z8 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav6-1A0A075B5Z8 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav6-1A0A075B5Z8 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC15.56■□□□□ 0.08
Trav6-1A0A075B5Z8 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
Trav6-1A0A075B5Z8 Gm6627-201ENSMUST00000218299 2386 ntBASIC15.56■□□□□ 0.08
Trav6-1A0A075B5Z8 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav6-1A0A075B5Z8 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav6-1A0A075B5Z8 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav6-1A0A075B5Z8 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav6-1A0A075B5Z8 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC15.56■□□□□ 0.08
Trav6-1A0A075B5Z8 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Trav6-1A0A075B5Z8 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC15.56■□□□□ 0.08
Trav6-1A0A075B5Z8 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Trav6-1A0A075B5Z8 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav6-1A0A075B5Z8 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Trav6-1A0A075B5Z8 Gm6085-201ENSMUST00000182774 1470 ntBASIC15.56■□□□□ 0.08
Trav6-1A0A075B5Z8 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trav6-1A0A075B5Z8 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Trav6-1A0A075B5Z8 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav6-1A0A075B5Z8 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Trav6-1A0A075B5Z8 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav6-1A0A075B5Z8 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Trav6-1A0A075B5Z8 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trav6-1A0A075B5Z8 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav6-1A0A075B5Z8 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC15.55■□□□□ 0.08
Trav6-1A0A075B5Z8 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav6-1A0A075B5Z8 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC15.55■□□□□ 0.08
Trav6-1A0A075B5Z8 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav6-1A0A075B5Z8 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav6-1A0A075B5Z8 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trav6-1A0A075B5Z8 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trav6-1A0A075B5Z8 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trav6-1A0A075B5Z8 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav6-1A0A075B5Z8 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav6-1A0A075B5Z8 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav6-1A0A075B5Z8 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trav6-1A0A075B5Z8 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trav6-1A0A075B5Z8 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trav6-1A0A075B5Z8 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav6-1A0A075B5Z8 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC15.53■□□□□ 0.08
Trav6-1A0A075B5Z8 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav6-1A0A075B5Z8 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav6-1A0A075B5Z8 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav6-1A0A075B5Z8 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav6-1A0A075B5Z8 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trav6-1A0A075B5Z8 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav6-1A0A075B5Z8 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav6-1A0A075B5Z8 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC15.53■□□□□ 0.08
Trav6-1A0A075B5Z8 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
Trav6-1A0A075B5Z8 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav6-1A0A075B5Z8 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trav6-1A0A075B5Z8 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav6-1A0A075B5Z8 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav6-1A0A075B5Z8 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav6-1A0A075B5Z8 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav6-1A0A075B5Z8 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav6-1A0A075B5Z8 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav6-1A0A075B5Z8 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Trav6-1A0A075B5Z8 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trav6-1A0A075B5Z8 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav6-1A0A075B5Z8 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav6-1A0A075B5Z8 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav6-1A0A075B5Z8 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav6-1A0A075B5Z8 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav6-1A0A075B5Z8 AC154266.1-201ENSMUST00000223190 503 ntBASIC15.52■□□□□ 0.08
Trav6-1A0A075B5Z8 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trav6-1A0A075B5Z8 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trav6-1A0A075B5Z8 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trav6-1A0A075B5Z8 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC15.52■□□□□ 0.07
Trav6-1A0A075B5Z8 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Trav6-1A0A075B5Z8 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trav6-1A0A075B5Z8 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trav6-1A0A075B5Z8 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav6-1A0A075B5Z8 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trav6-1A0A075B5Z8 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav6-1A0A075B5Z8 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav6-1A0A075B5Z8 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav6-1A0A075B5Z8 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav6-1A0A075B5Z8 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trav6-1A0A075B5Z8 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav6-1A0A075B5Z8 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav6-1A0A075B5Z8 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Trav6-1A0A075B5Z8 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav6-1A0A075B5Z8 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav6-1A0A075B5Z8 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav6-1A0A075B5Z8 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Trav6-1A0A075B5Z8 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC15.5■□□□□ 0.07
Trav6-1A0A075B5Z8 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Trav6-1A0A075B5Z8 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms