Protein–RNA interactions for Protein: A0A075B5Z7

Trav5-1, T cell receptor alpha variable 5-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-1A0A075B5Z7 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav5-1A0A075B5Z7 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav5-1A0A075B5Z7 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav5-1A0A075B5Z7 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav5-1A0A075B5Z7 Gm13234-201ENSMUST00000120010 747 ntBASIC16.66■□□□□ 0.26
Trav5-1A0A075B5Z7 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC16.66■□□□□ 0.26
Trav5-1A0A075B5Z7 Gm42569-201ENSMUST00000200539 472 ntBASIC16.66■□□□□ 0.26
Trav5-1A0A075B5Z7 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav5-1A0A075B5Z7 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav5-1A0A075B5Z7 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Trav5-1A0A075B5Z7 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav5-1A0A075B5Z7 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav5-1A0A075B5Z7 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trav5-1A0A075B5Z7 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav5-1A0A075B5Z7 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Trav5-1A0A075B5Z7 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC16.66■□□□□ 0.26
Trav5-1A0A075B5Z7 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav5-1A0A075B5Z7 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Trav5-1A0A075B5Z7 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Trav5-1A0A075B5Z7 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav5-1A0A075B5Z7 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC16.65■□□□□ 0.26
Trav5-1A0A075B5Z7 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC16.65■□□□□ 0.26
Trav5-1A0A075B5Z7 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Trav5-1A0A075B5Z7 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC16.65■□□□□ 0.26
Trav5-1A0A075B5Z7 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Trav5-1A0A075B5Z7 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Trav5-1A0A075B5Z7 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Trav5-1A0A075B5Z7 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
Trav5-1A0A075B5Z7 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav5-1A0A075B5Z7 Gm6277-202ENSMUST00000224036 2779 ntBASIC16.65■□□□□ 0.26
Trav5-1A0A075B5Z7 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav5-1A0A075B5Z7 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav5-1A0A075B5Z7 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Trav5-1A0A075B5Z7 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Trav5-1A0A075B5Z7 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav5-1A0A075B5Z7 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav5-1A0A075B5Z7 Gm10033-202ENSMUST00000211874 928 ntBASIC16.64■□□□□ 0.25
Trav5-1A0A075B5Z7 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav5-1A0A075B5Z7 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav5-1A0A075B5Z7 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav5-1A0A075B5Z7 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav5-1A0A075B5Z7 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav5-1A0A075B5Z7 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav5-1A0A075B5Z7 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC16.64■□□□□ 0.25
Trav5-1A0A075B5Z7 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav5-1A0A075B5Z7 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav5-1A0A075B5Z7 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav5-1A0A075B5Z7 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Trav5-1A0A075B5Z7 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Trav5-1A0A075B5Z7 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Trav5-1A0A075B5Z7 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC16.63■□□□□ 0.25
Trav5-1A0A075B5Z7 AV356131-201ENSMUST00000206201 750 ntBASIC16.63■□□□□ 0.25
Trav5-1A0A075B5Z7 Slc35b2-207ENSMUST00000226086 850 ntBASIC16.63■□□□□ 0.25
Trav5-1A0A075B5Z7 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav5-1A0A075B5Z7 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav5-1A0A075B5Z7 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav5-1A0A075B5Z7 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC16.63■□□□□ 0.25
Trav5-1A0A075B5Z7 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav5-1A0A075B5Z7 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav5-1A0A075B5Z7 Reep4-203ENSMUST00000226563 1444 ntBASIC16.62■□□□□ 0.25
Trav5-1A0A075B5Z7 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Trav5-1A0A075B5Z7 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC16.62■□□□□ 0.25
Trav5-1A0A075B5Z7 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Trav5-1A0A075B5Z7 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Trav5-1A0A075B5Z7 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav5-1A0A075B5Z7 Gm10849-201ENSMUST00000100397 618 ntBASIC16.62■□□□□ 0.25
Trav5-1A0A075B5Z7 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC16.62■□□□□ 0.25
Trav5-1A0A075B5Z7 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC16.62■□□□□ 0.25
Trav5-1A0A075B5Z7 CT030146.1-201ENSMUST00000220919 217 ntBASIC16.62■□□□□ 0.25
Trav5-1A0A075B5Z7 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Trav5-1A0A075B5Z7 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Trav5-1A0A075B5Z7 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav5-1A0A075B5Z7 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Trav5-1A0A075B5Z7 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Trav5-1A0A075B5Z7 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Trav5-1A0A075B5Z7 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav5-1A0A075B5Z7 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav5-1A0A075B5Z7 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav5-1A0A075B5Z7 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Trav5-1A0A075B5Z7 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trav5-1A0A075B5Z7 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC16.61■□□□□ 0.25
Trav5-1A0A075B5Z7 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav5-1A0A075B5Z7 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trav5-1A0A075B5Z7 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav5-1A0A075B5Z7 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC16.61■□□□□ 0.25
Trav5-1A0A075B5Z7 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav5-1A0A075B5Z7 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC16.61■□□□□ 0.25
Trav5-1A0A075B5Z7 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Trav5-1A0A075B5Z7 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav5-1A0A075B5Z7 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trav5-1A0A075B5Z7 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Trav5-1A0A075B5Z7 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav5-1A0A075B5Z7 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav5-1A0A075B5Z7 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC16.6■□□□□ 0.25
Trav5-1A0A075B5Z7 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC16.6■□□□□ 0.25
Trav5-1A0A075B5Z7 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav5-1A0A075B5Z7 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav5-1A0A075B5Z7 Gm27405-201ENSMUST00000184201 112 ntBASIC16.6■□□□□ 0.25
Trav5-1A0A075B5Z7 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trav5-1A0A075B5Z7 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC16.6■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms