Protein–RNA interactions for Protein: W4VSP1

Speer3, MCG129800, mousemouse

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Speer3W4VSP1 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Speer3W4VSP1 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Speer3W4VSP1 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Speer3W4VSP1 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC19.68■□□□□ 0.74
Speer3W4VSP1 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Speer3W4VSP1 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Speer3W4VSP1 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC19.68■□□□□ 0.74
Speer3W4VSP1 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Speer3W4VSP1 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Speer3W4VSP1 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Speer3W4VSP1 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Speer3W4VSP1 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Speer3W4VSP1 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC19.67■□□□□ 0.74
Speer3W4VSP1 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Speer3W4VSP1 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Speer3W4VSP1 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Speer3W4VSP1 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Speer3W4VSP1 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Speer3W4VSP1 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Speer3W4VSP1 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Speer3W4VSP1 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Speer3W4VSP1 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Speer3W4VSP1 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Speer3W4VSP1 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Speer3W4VSP1 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Speer3W4VSP1 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC19.66■□□□□ 0.74
Speer3W4VSP1 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Speer3W4VSP1 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Speer3W4VSP1 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Speer3W4VSP1 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Speer3W4VSP1 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Speer3W4VSP1 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Speer3W4VSP1 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Speer3W4VSP1 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Speer3W4VSP1 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Speer3W4VSP1 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Speer3W4VSP1 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC19.65■□□□□ 0.74
Speer3W4VSP1 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Speer3W4VSP1 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Speer3W4VSP1 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC19.65■□□□□ 0.74
Speer3W4VSP1 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
Speer3W4VSP1 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Speer3W4VSP1 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Speer3W4VSP1 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Speer3W4VSP1 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC19.64■□□□□ 0.73
Speer3W4VSP1 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Speer3W4VSP1 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC19.64■□□□□ 0.73
Speer3W4VSP1 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
Speer3W4VSP1 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC19.64■□□□□ 0.73
Speer3W4VSP1 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC19.64■□□□□ 0.73
Speer3W4VSP1 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Speer3W4VSP1 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Speer3W4VSP1 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC19.64■□□□□ 0.73
Speer3W4VSP1 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Speer3W4VSP1 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Speer3W4VSP1 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Speer3W4VSP1 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Speer3W4VSP1 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Speer3W4VSP1 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Speer3W4VSP1 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Speer3W4VSP1 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Speer3W4VSP1 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Speer3W4VSP1 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Speer3W4VSP1 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Speer3W4VSP1 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
Speer3W4VSP1 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Speer3W4VSP1 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
Speer3W4VSP1 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Speer3W4VSP1 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Speer3W4VSP1 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Speer3W4VSP1 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Speer3W4VSP1 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC19.62■□□□□ 0.73
Speer3W4VSP1 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC19.62■□□□□ 0.73
Speer3W4VSP1 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
Speer3W4VSP1 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Speer3W4VSP1 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Speer3W4VSP1 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Speer3W4VSP1 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Speer3W4VSP1 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Speer3W4VSP1 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Speer3W4VSP1 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Speer3W4VSP1 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Speer3W4VSP1 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Speer3W4VSP1 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Speer3W4VSP1 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Speer3W4VSP1 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Speer3W4VSP1 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Speer3W4VSP1 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Speer3W4VSP1 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Speer3W4VSP1 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Speer3W4VSP1 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Speer3W4VSP1 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Speer3W4VSP1 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Speer3W4VSP1 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Speer3W4VSP1 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC19.6■□□□□ 0.73
Speer3W4VSP1 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Speer3W4VSP1 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Speer3W4VSP1 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC19.6■□□□□ 0.73
Speer3W4VSP1 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
Speer3W4VSP1 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 53.1 ms