Protein–RNA interactions for Protein: S4R2K0

Pdf, Peptide deformylase, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdfS4R2K0 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PdfS4R2K0 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
PdfS4R2K0 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PdfS4R2K0 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
PdfS4R2K0 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC14.85□□□□□ -0.03
PdfS4R2K0 Rps24-207ENSMUST00000224568 714 ntBASIC14.85□□□□□ -0.03
PdfS4R2K0 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PdfS4R2K0 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC14.85□□□□□ -0.03
PdfS4R2K0 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PdfS4R2K0 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
PdfS4R2K0 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PdfS4R2K0 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PdfS4R2K0 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
PdfS4R2K0 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PdfS4R2K0 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
PdfS4R2K0 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC14.85□□□□□ -0.03
PdfS4R2K0 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
PdfS4R2K0 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
PdfS4R2K0 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PdfS4R2K0 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
PdfS4R2K0 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
PdfS4R2K0 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PdfS4R2K0 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PdfS4R2K0 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PdfS4R2K0 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PdfS4R2K0 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
PdfS4R2K0 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
PdfS4R2K0 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PdfS4R2K0 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PdfS4R2K0 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC14.84□□□□□ -0.03
PdfS4R2K0 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PdfS4R2K0 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PdfS4R2K0 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PdfS4R2K0 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
PdfS4R2K0 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PdfS4R2K0 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
PdfS4R2K0 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
PdfS4R2K0 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PdfS4R2K0 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
PdfS4R2K0 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
PdfS4R2K0 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PdfS4R2K0 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
PdfS4R2K0 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
PdfS4R2K0 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
PdfS4R2K0 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
PdfS4R2K0 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PdfS4R2K0 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
PdfS4R2K0 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
PdfS4R2K0 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
PdfS4R2K0 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
PdfS4R2K0 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
PdfS4R2K0 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PdfS4R2K0 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
PdfS4R2K0 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PdfS4R2K0 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC14.82□□□□□ -0.04
PdfS4R2K0 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PdfS4R2K0 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC14.82□□□□□ -0.04
PdfS4R2K0 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
PdfS4R2K0 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
PdfS4R2K0 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
PdfS4R2K0 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PdfS4R2K0 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
PdfS4R2K0 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PdfS4R2K0 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PdfS4R2K0 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PdfS4R2K0 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PdfS4R2K0 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
PdfS4R2K0 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PdfS4R2K0 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PdfS4R2K0 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PdfS4R2K0 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC14.81□□□□□ -0.04
PdfS4R2K0 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
PdfS4R2K0 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
PdfS4R2K0 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PdfS4R2K0 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PdfS4R2K0 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC14.8□□□□□ -0.04
PdfS4R2K0 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PdfS4R2K0 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC14.8□□□□□ -0.04
PdfS4R2K0 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PdfS4R2K0 Gm45102-201ENSMUST00000207427 857 ntBASIC14.8□□□□□ -0.04
PdfS4R2K0 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PdfS4R2K0 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
PdfS4R2K0 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
PdfS4R2K0 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PdfS4R2K0 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PdfS4R2K0 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PdfS4R2K0 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PdfS4R2K0 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
PdfS4R2K0 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC14.8□□□□□ -0.04
PdfS4R2K0 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC14.8□□□□□ -0.04
PdfS4R2K0 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PdfS4R2K0 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PdfS4R2K0 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
PdfS4R2K0 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PdfS4R2K0 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
PdfS4R2K0 Gm9954-202ENSMUST00000198686 4725 ntBASIC14.79□□□□□ -0.04
PdfS4R2K0 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PdfS4R2K0 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PdfS4R2K0 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PdfS4R2K0 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms