Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
H2afb2S4R1M3 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC19.47■□□□□ 0.71
H2afb2S4R1M3 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
H2afb2S4R1M3 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
H2afb2S4R1M3 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
H2afb2S4R1M3 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC19.46■□□□□ 0.71
H2afb2S4R1M3 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
H2afb2S4R1M3 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
H2afb2S4R1M3 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
H2afb2S4R1M3 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
H2afb2S4R1M3 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
H2afb2S4R1M3 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
H2afb2S4R1M3 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
H2afb2S4R1M3 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC19.45■□□□□ 0.7
H2afb2S4R1M3 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC19.45■□□□□ 0.7
H2afb2S4R1M3 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
H2afb2S4R1M3 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
H2afb2S4R1M3 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC19.45■□□□□ 0.7
H2afb2S4R1M3 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
H2afb2S4R1M3 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
H2afb2S4R1M3 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
H2afb2S4R1M3 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
H2afb2S4R1M3 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
H2afb2S4R1M3 Hsf1-204ENSMUST00000226872 2104 ntBASIC19.44■□□□□ 0.7
H2afb2S4R1M3 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
H2afb2S4R1M3 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
H2afb2S4R1M3 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
H2afb2S4R1M3 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
H2afb2S4R1M3 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
H2afb2S4R1M3 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
H2afb2S4R1M3 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
H2afb2S4R1M3 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC19.43■□□□□ 0.7
H2afb2S4R1M3 Serp2-204ENSMUST00000228055 705 ntBASIC19.43■□□□□ 0.7
H2afb2S4R1M3 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC19.43■□□□□ 0.7
H2afb2S4R1M3 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
H2afb2S4R1M3 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
H2afb2S4R1M3 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
H2afb2S4R1M3 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
H2afb2S4R1M3 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC19.42■□□□□ 0.7
H2afb2S4R1M3 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
H2afb2S4R1M3 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
H2afb2S4R1M3 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
H2afb2S4R1M3 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
H2afb2S4R1M3 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
H2afb2S4R1M3 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
H2afb2S4R1M3 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
H2afb2S4R1M3 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
H2afb2S4R1M3 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
H2afb2S4R1M3 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
H2afb2S4R1M3 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
H2afb2S4R1M3 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
H2afb2S4R1M3 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
H2afb2S4R1M3 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
H2afb2S4R1M3 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
H2afb2S4R1M3 Gm12251-201ENSMUST00000117893 792 ntBASIC19.4■□□□□ 0.7
H2afb2S4R1M3 Gm12821-201ENSMUST00000120022 600 ntBASIC19.4■□□□□ 0.7
H2afb2S4R1M3 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
H2afb2S4R1M3 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
H2afb2S4R1M3 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC19.4■□□□□ 0.7
H2afb2S4R1M3 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
H2afb2S4R1M3 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC19.4■□□□□ 0.7
H2afb2S4R1M3 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
H2afb2S4R1M3 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
H2afb2S4R1M3 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
H2afb2S4R1M3 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
H2afb2S4R1M3 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
H2afb2S4R1M3 Mir7075-201ENSMUST00000184187 82 ntBASIC19.39■□□□□ 0.69
H2afb2S4R1M3 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
H2afb2S4R1M3 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
H2afb2S4R1M3 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
H2afb2S4R1M3 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
H2afb2S4R1M3 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
H2afb2S4R1M3 Gm42911-201ENSMUST00000199360 1630 ntBASIC19.39■□□□□ 0.69
H2afb2S4R1M3 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
H2afb2S4R1M3 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
H2afb2S4R1M3 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC19.39■□□□□ 0.69
H2afb2S4R1M3 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
H2afb2S4R1M3 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
H2afb2S4R1M3 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
H2afb2S4R1M3 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC19.38■□□□□ 0.69
H2afb2S4R1M3 Appbp2os-202ENSMUST00000206972 447 ntBASIC19.38■□□□□ 0.69
H2afb2S4R1M3 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
H2afb2S4R1M3 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
H2afb2S4R1M3 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
H2afb2S4R1M3 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
H2afb2S4R1M3 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
H2afb2S4R1M3 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
H2afb2S4R1M3 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
H2afb2S4R1M3 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
H2afb2S4R1M3 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
H2afb2S4R1M3 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
H2afb2S4R1M3 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
H2afb2S4R1M3 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
H2afb2S4R1M3 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
H2afb2S4R1M3 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
H2afb2S4R1M3 Flvcr1-202ENSMUST00000191946 1216 ntBASIC19.37■□□□□ 0.69
H2afb2S4R1M3 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
H2afb2S4R1M3 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
H2afb2S4R1M3 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
H2afb2S4R1M3 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 855.8 ms