Protein–RNA interactions for Protein: Q9Z2L7

Crlf3, Cytokine receptor-like factor 3, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crlf3Q9Z2L7 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Crlf3Q9Z2L7 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Crlf3Q9Z2L7 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Crlf3Q9Z2L7 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Crlf3Q9Z2L7 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC19.57■□□□□ 0.72
Crlf3Q9Z2L7 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC19.57■□□□□ 0.72
Crlf3Q9Z2L7 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC19.57■□□□□ 0.72
Crlf3Q9Z2L7 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC19.57■□□□□ 0.72
Crlf3Q9Z2L7 Mir6236-201ENSMUST00000184437 123 ntBASIC19.57■□□□□ 0.72
Crlf3Q9Z2L7 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Crlf3Q9Z2L7 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Crlf3Q9Z2L7 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC19.57■□□□□ 0.72
Crlf3Q9Z2L7 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Crlf3Q9Z2L7 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Crlf3Q9Z2L7 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Crlf3Q9Z2L7 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Crlf3Q9Z2L7 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Crlf3Q9Z2L7 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Crlf3Q9Z2L7 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Crlf3Q9Z2L7 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Crlf3Q9Z2L7 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Crlf3Q9Z2L7 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Crlf3Q9Z2L7 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Crlf3Q9Z2L7 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Crlf3Q9Z2L7 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Crlf3Q9Z2L7 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Crlf3Q9Z2L7 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC19.55■□□□□ 0.72
Crlf3Q9Z2L7 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC19.55■□□□□ 0.72
Crlf3Q9Z2L7 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Crlf3Q9Z2L7 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Crlf3Q9Z2L7 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Crlf3Q9Z2L7 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Crlf3Q9Z2L7 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Crlf3Q9Z2L7 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Crlf3Q9Z2L7 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC19.55■□□□□ 0.72
Crlf3Q9Z2L7 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Crlf3Q9Z2L7 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Crlf3Q9Z2L7 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Crlf3Q9Z2L7 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Crlf3Q9Z2L7 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Crlf3Q9Z2L7 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Crlf3Q9Z2L7 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Crlf3Q9Z2L7 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Crlf3Q9Z2L7 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Crlf3Q9Z2L7 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Crlf3Q9Z2L7 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Crlf3Q9Z2L7 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC19.54■□□□□ 0.72
Crlf3Q9Z2L7 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Crlf3Q9Z2L7 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Crlf3Q9Z2L7 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
Crlf3Q9Z2L7 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Crlf3Q9Z2L7 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Crlf3Q9Z2L7 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Crlf3Q9Z2L7 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Crlf3Q9Z2L7 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Crlf3Q9Z2L7 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC19.53■□□□□ 0.72
Crlf3Q9Z2L7 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC19.53■□□□□ 0.72
Crlf3Q9Z2L7 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC19.53■□□□□ 0.72
Crlf3Q9Z2L7 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC19.53■□□□□ 0.72
Crlf3Q9Z2L7 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Crlf3Q9Z2L7 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC19.53■□□□□ 0.72
Crlf3Q9Z2L7 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Crlf3Q9Z2L7 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Crlf3Q9Z2L7 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Crlf3Q9Z2L7 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Crlf3Q9Z2L7 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Crlf3Q9Z2L7 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Crlf3Q9Z2L7 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Crlf3Q9Z2L7 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC19.52■□□□□ 0.72
Crlf3Q9Z2L7 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Crlf3Q9Z2L7 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC19.52■□□□□ 0.72
Crlf3Q9Z2L7 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC19.52■□□□□ 0.72
Crlf3Q9Z2L7 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC19.52■□□□□ 0.72
Crlf3Q9Z2L7 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Crlf3Q9Z2L7 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Crlf3Q9Z2L7 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Crlf3Q9Z2L7 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC19.52■□□□□ 0.71
Crlf3Q9Z2L7 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Crlf3Q9Z2L7 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Crlf3Q9Z2L7 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Crlf3Q9Z2L7 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Crlf3Q9Z2L7 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Crlf3Q9Z2L7 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Crlf3Q9Z2L7 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Crlf3Q9Z2L7 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Crlf3Q9Z2L7 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Crlf3Q9Z2L7 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Crlf3Q9Z2L7 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Crlf3Q9Z2L7 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC19.51■□□□□ 0.71
Crlf3Q9Z2L7 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC19.5■□□□□ 0.71
Crlf3Q9Z2L7 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC19.5■□□□□ 0.71
Crlf3Q9Z2L7 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Crlf3Q9Z2L7 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Crlf3Q9Z2L7 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC19.5■□□□□ 0.71
Crlf3Q9Z2L7 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Crlf3Q9Z2L7 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Crlf3Q9Z2L7 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Crlf3Q9Z2L7 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Crlf3Q9Z2L7 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Crlf3Q9Z2L7 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms