Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Smarcb1Q9Z0H3 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Smarcb1Q9Z0H3 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC20.24■□□□□ 0.83
Smarcb1Q9Z0H3 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Smarcb1Q9Z0H3 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Smarcb1Q9Z0H3 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
Smarcb1Q9Z0H3 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC20.24■□□□□ 0.83
Smarcb1Q9Z0H3 Gm13146-201ENSMUST00000118508 780 ntBASIC20.24■□□□□ 0.83
Smarcb1Q9Z0H3 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC20.24■□□□□ 0.83
Smarcb1Q9Z0H3 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Smarcb1Q9Z0H3 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC20.24■□□□□ 0.83
Smarcb1Q9Z0H3 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Smarcb1Q9Z0H3 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC20.24■□□□□ 0.83
Smarcb1Q9Z0H3 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Smarcb1Q9Z0H3 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Smarcb1Q9Z0H3 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Smarcb1Q9Z0H3 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Smarcb1Q9Z0H3 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Smarcb1Q9Z0H3 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Smarcb1Q9Z0H3 Gm12933-201ENSMUST00000120203 872 ntBASIC20.23■□□□□ 0.83
Smarcb1Q9Z0H3 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC20.23■□□□□ 0.83
Smarcb1Q9Z0H3 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Smarcb1Q9Z0H3 Gm7514-201ENSMUST00000209475 934 ntBASIC20.23■□□□□ 0.83
Smarcb1Q9Z0H3 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Smarcb1Q9Z0H3 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Smarcb1Q9Z0H3 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Smarcb1Q9Z0H3 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Smarcb1Q9Z0H3 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC20.23■□□□□ 0.83
Smarcb1Q9Z0H3 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Smarcb1Q9Z0H3 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Smarcb1Q9Z0H3 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Smarcb1Q9Z0H3 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Smarcb1Q9Z0H3 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Smarcb1Q9Z0H3 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Smarcb1Q9Z0H3 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Smarcb1Q9Z0H3 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Smarcb1Q9Z0H3 Gm6802-201ENSMUST00000167843 1983 ntBASIC20.22■□□□□ 0.83
Smarcb1Q9Z0H3 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Smarcb1Q9Z0H3 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Smarcb1Q9Z0H3 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC20.22■□□□□ 0.83
Smarcb1Q9Z0H3 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Smarcb1Q9Z0H3 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Smarcb1Q9Z0H3 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Smarcb1Q9Z0H3 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Smarcb1Q9Z0H3 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC20.21■□□□□ 0.83
Smarcb1Q9Z0H3 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC20.21■□□□□ 0.83
Smarcb1Q9Z0H3 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
Smarcb1Q9Z0H3 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
Smarcb1Q9Z0H3 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Smarcb1Q9Z0H3 Ap3s1-204ENSMUST00000225520 957 ntBASIC20.21■□□□□ 0.83
Smarcb1Q9Z0H3 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Smarcb1Q9Z0H3 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Smarcb1Q9Z0H3 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Smarcb1Q9Z0H3 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Smarcb1Q9Z0H3 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Smarcb1Q9Z0H3 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Smarcb1Q9Z0H3 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC20.2■□□□□ 0.82
Smarcb1Q9Z0H3 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Smarcb1Q9Z0H3 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Smarcb1Q9Z0H3 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Smarcb1Q9Z0H3 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Smarcb1Q9Z0H3 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Smarcb1Q9Z0H3 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC20.2■□□□□ 0.82
Smarcb1Q9Z0H3 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC20.2■□□□□ 0.82
Smarcb1Q9Z0H3 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC20.2■□□□□ 0.82
Smarcb1Q9Z0H3 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Smarcb1Q9Z0H3 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Smarcb1Q9Z0H3 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Smarcb1Q9Z0H3 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Smarcb1Q9Z0H3 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Smarcb1Q9Z0H3 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Smarcb1Q9Z0H3 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Smarcb1Q9Z0H3 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Smarcb1Q9Z0H3 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC20.19■□□□□ 0.82
Smarcb1Q9Z0H3 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Smarcb1Q9Z0H3 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC20.19■□□□□ 0.82
Smarcb1Q9Z0H3 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Smarcb1Q9Z0H3 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
Smarcb1Q9Z0H3 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Smarcb1Q9Z0H3 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Smarcb1Q9Z0H3 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Smarcb1Q9Z0H3 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Smarcb1Q9Z0H3 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC20.18■□□□□ 0.82
Smarcb1Q9Z0H3 Gm29257-201ENSMUST00000186115 639 ntBASIC20.18■□□□□ 0.82
Smarcb1Q9Z0H3 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Smarcb1Q9Z0H3 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC20.18■□□□□ 0.82
Smarcb1Q9Z0H3 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Smarcb1Q9Z0H3 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Smarcb1Q9Z0H3 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Smarcb1Q9Z0H3 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC20.17■□□□□ 0.82
Smarcb1Q9Z0H3 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Smarcb1Q9Z0H3 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Smarcb1Q9Z0H3 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Smarcb1Q9Z0H3 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Smarcb1Q9Z0H3 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Smarcb1Q9Z0H3 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Smarcb1Q9Z0H3 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Smarcb1Q9Z0H3 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Smarcb1Q9Z0H3 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Smarcb1Q9Z0H3 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 367.7 ms